RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 C1orf115Q9H7X2 142 aa21■□□□□ 0.95
HMGN1-203ENST00000380748 DCP1AQ9NPI6 582 aaPredicted RBP21■□□□□ 0.95
HMGN1-203ENST00000380748 CXXC1Q9P0U4 656 aaPredicted RBP21■□□□□ 0.95
HMGN1-203ENST00000380748 ZHX1Q9UKY1 873 aaPredicted RBP21■□□□□ 0.95
HMGN1-203ENST00000380748 ZNF214Q9UL59 606 aaPredicted RBP21■□□□□ 0.95
HMGN1-203ENST00000380748 YBX2Q9Y2T7 364 aaKnown RBP21■□□□□ 0.95
HMGN1-203ENST00000380748 ELP1O95163 1332 aa21■□□□□ 0.95
HMGN1-203ENST00000380748 IPO8O15397 1037 aaKnown RBP20.99■□□□□ 0.95
HMGN1-203ENST00000380748 REPS2Q8NFH8 660 aa20.99■□□□□ 0.95
HMGN1-203ENST00000380748 FRAT1Q92837 279 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-203ENST00000380748 SWAP70Q9UH65 585 aa20.99■□□□□ 0.95
HMGN1-203ENST00000380748 NOP58Q9Y2X3 529 aaKnown RBP20.99■□□□□ 0.95
HMGN1-203ENST00000380748 TRANK1O15050 2925 aa20.99■□□□□ 0.95
HMGN1-203ENST00000380748 ADCY6O43306 1168 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 DUSP11O75319 330 aaKnown RBP20.98■□□□□ 0.95
HMGN1-203ENST00000380748 ASGR1P07306 291 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 PDE6AP16499 860 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 CST5P28325 142 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-203ENST00000380748 FAM126BQ8IXS8 530 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 LCORLQ8N3X6 602 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 TMEM57Q8N5G2 664 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 HERVK_113Q902F9 699 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 VTI1AQ96AJ9 217 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 SLC28A3Q9HAS3 691 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 PPP1R9AQ9ULJ8 1098 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 SYNGAP1Q96PV0 1343 aa20.98■□□□□ 0.95
HMGN1-203ENST00000380748 SMIM22K7EJ46 135 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 ARVCFO00192 962 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 C6orf222P0C671 652 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-203ENST00000380748 BMP1P13497 986 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 CYP2C18P33260 490 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 TFF2Q03403 129 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 SLC9C2Q5TAH2 1124 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 MICALL1Q8N3F8 863 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 MSL3Q8N5Y2 521 aaKnown RBP20.97■□□□□ 0.95
HMGN1-203ENST00000380748 C1QTNF1Q9BXJ1 281 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 IL23AQ9NPF7 189 aa20.97■□□□□ 0.95
HMGN1-203ENST00000380748 A0A0U1RQG5 324 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-203ENST00000380748 EEF2P13639 858 aaKnown RBP20.96■□□□□ 0.95
HMGN1-203ENST00000380748 COPB2P35606 906 aa20.96■□□□□ 0.95
HMGN1-203ENST00000380748 ZNF532Q9HCE3 1301 aa20.96■□□□□ 0.95
HMGN1-203ENST00000380748 FAM83BQ5T0W9 1011 aa20.95■□□□□ 0.94
HMGN1-203ENST00000380748 MAMDC4Q6UXC1 1216 aa20.95■□□□□ 0.94
HMGN1-203ENST00000380748 PCSK9Q8NBP7 692 aaKnown RBP20.95■□□□□ 0.94
HMGN1-203ENST00000380748 UPF3AQ9H1J1 476 aaKnown RBP20.95■□□□□ 0.94
HMGN1-203ENST00000380748 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
HMGN1-203ENST00000380748 MCM3APO60318 1980 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 DNAJC25-GNG10A0A024R161 153 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 CYP2D7A0A087X1C5 515 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 TCRBV5S4A2TA0A5A2 114 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 TLR3O15455 904 aaKnown RBP20.94■□□□□ 0.94
HMGN1-203ENST00000380748 RAD21O60216 631 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 KCNQ1P51787 676 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 RABGGTBP53611 331 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 AACSQ86V21 672 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 DDX11Q96FC9 970 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 TSPYL2Q9H2G4 693 aaPredicted RBP20.94■□□□□ 0.94
HMGN1-203ENST00000380748 RIPK3Q9Y572 518 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 UMODL1Q5DID0 1318 aa20.94■□□□□ 0.94
HMGN1-203ENST00000380748 PRKAB2O43741 272 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 CD4P01730 458 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 FGBP02675 491 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 CDK8P49336 464 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 GJA9P57773 515 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 ACVR2BQ13705 512 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 GNASQ5JWF2 1037 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 SNRNP48Q6IEG0 339 aaKnown RBP20.93■□□□□ 0.94
HMGN1-203ENST00000380748 OTOP2Q7RTS6 562 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 MTIF3Q9H2K0 278 aaKnown RBP20.93■□□□□ 0.94
HMGN1-203ENST00000380748 ARMT1Q9H993 441 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 SPC25Q9HBM1 224 aa20.93■□□□□ 0.94
HMGN1-203ENST00000380748 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.93■□□□□ 0.94
HMGN1-203ENST00000380748 MYOGP15173 224 aa20.92■□□□□ 0.94
HMGN1-203ENST00000380748 TTF1Q15361 905 aaPredicted RBP20.92■□□□□ 0.94
HMGN1-203ENST00000380748 CCDC144BQ3MJ40 725 aa20.92■□□□□ 0.94
HMGN1-203ENST00000380748 NUP88Q99567 741 aaPredicted RBP20.92■□□□□ 0.94
HMGN1-203ENST00000380748 TEX13BQ9BXU2 312 aa20.92■□□□□ 0.94
HMGN1-203ENST00000380748 GOPCQ9HD26 462 aa20.92■□□□□ 0.94
HMGN1-203ENST00000380748 CTAGE5O15320 804 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 PRRC2BQ5JSZ5 2229 aaKnown RBP20.91■□□□□ 0.94
HMGN1-203ENST00000380748 PPP2R2DQ66LE6 453 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 FGD4Q96M96 766 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 LRFN3Q9BTN0 628 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 HIPK3Q9H422 1215 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 EPHX3Q9H6B9 360 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 KANSL2Q9H9L4 492 aa20.91■□□□□ 0.94
HMGN1-203ENST00000380748 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-203ENST00000380748 SLC4A3P48751 1232 aa20.9■□□□□ 0.94
HMGN1-203ENST00000380748 BEX3Q00994 111 aa20.9■□□□□ 0.94
HMGN1-203ENST00000380748 SKIV2LQ15477 1246 aaKnown RBP20.9■□□□□ 0.94
HMGN1-203ENST00000380748 AAK1Q2M2I8 961 aa20.9■□□□□ 0.94
HMGN1-203ENST00000380748 SLFNL1Q499Z3 407 aa20.9■□□□□ 0.94
HMGN1-203ENST00000380748 ZNF467Q7Z7K2 595 aaPredicted RBP20.9■□□□□ 0.94
HMGN1-203ENST00000380748 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
HMGN1-203ENST00000380748 GOLIM4O00461 696 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 CCL23P55773 120 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 C12orf60Q5U649 245 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 C16orf86Q6ZW13 317 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 DNAJC2Q99543 621 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms