RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
VPS16-203ENST00000380469 ACRBPQ8NEB7 543 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 MAPK8IP1Q9UQF2 711 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 KRT9P35527 623 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 ERVK-24P63145 666 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 SLC4A8Q2Y0W8 1093 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 C12orf60Q5U649 245 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 ANKS1AQ92625 1134 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 MKNK2Q9HBH9 465 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 MYO1AQ9UBC5 1043 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 PUF60Q9UHX1 559 aaKnown RBP18.39■□□□□ 0.53
VPS16-203ENST00000380469 GDAQ9Y2T3 454 aa18.39■□□□□ 0.53
VPS16-203ENST00000380469 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
VPS16-203ENST00000380469 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 FAM205AQ6ZU69 1335 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 ROBO1Q9Y6N7 1651 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 CCDC151A5D8V7 595 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 UBA7P41226 1012 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 STIM1Q13586 685 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 GRM4Q14833 912 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 GALNT17Q6IS24 598 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 SLC35F6Q8N357 371 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 CASZ1Q86V15 1759 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 POLR3GO15318 223 aaPredicted RBP18.38■□□□□ 0.53
VPS16-203ENST00000380469 SASH3O75995 380 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 MYL1P05976 194 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 STAG2Q8N3U4 1231 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 RASGRP4Q8TDF6 673 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 NAPGQ99747 312 aaPredicted RBP18.38■□□□□ 0.53
VPS16-203ENST00000380469 JAG2Q9Y219 1238 aa18.38■□□□□ 0.53
VPS16-203ENST00000380469 CCDC88AQ3V6T2 1871 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 PARP1P09874 1014 aaKnown RBP18.37■□□□□ 0.53
VPS16-203ENST00000380469 KCNB1Q14721 858 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 BARGINQ6ZT62 677 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 KIAA1551Q9HCM1 1747 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 MYH8P13535 1937 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 SEMA3FQ13275 785 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 SMC1AQ14683 1233 aaKnown RBP18.37■□□□□ 0.53
VPS16-203ENST00000380469 TSR1Q2NL82 804 aaKnown RBP18.37■□□□□ 0.53
VPS16-203ENST00000380469 UBXN6Q9BZV1 441 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
VPS16-203ENST00000380469 AHDC1Q5TGY3 1603 aaPredicted RBP18.36■□□□□ 0.53
VPS16-203ENST00000380469 RNF225M0QZC1 329 aaPredicted RBP18.36■□□□□ 0.53
VPS16-203ENST00000380469 LAD1O00515 517 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 LDHBP07195 334 aaKnown RBP18.36■□□□□ 0.53
VPS16-203ENST00000380469 TSPY3P0CV98 308 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 TSPY8P0CW00 308 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 EEF1GP26641 437 aaKnown RBP18.36■□□□□ 0.53
VPS16-203ENST00000380469 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 HEATR3Q7Z4Q2 680 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 ZNF444Q8N0Y2 327 aaPredicted RBP18.36■□□□□ 0.53
VPS16-203ENST00000380469 DAGLBQ8NCG7 672 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 FUT8Q9BYC5 575 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 MAGEC2Q9UBF1 373 aaPredicted RBP18.36■□□□□ 0.53
VPS16-203ENST00000380469 NARFQ9UHQ1 456 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 MAST2Q6P0Q8 1798 aa18.36■□□□□ 0.53
VPS16-203ENST00000380469 M0R2N6 131 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 PES1O00541 588 aaKnown RBP18.35■□□□□ 0.53
VPS16-203ENST00000380469 CYP2C19P33261 490 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 KCNQ4P56696 695 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 PIP4K2BP78356 416 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 WHAMMP3Q1A5X7 153 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 LONRF2Q1L5Z9 754 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 MB21D1Q8N884 522 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 THAP9Q9H5L6 903 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 ERICH4A6NGS2 130 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 PSMA7O14818 248 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 ZPR1O75312 459 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 OAS2P29728 719 aaKnown RBP18.35■□□□□ 0.53
VPS16-203ENST00000380469 GSTO1P78417 241 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 INF2Q27J81 1249 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 NAALADL2Q58DX5 795 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 OR8K1Q8NGG5 319 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 WDR66Q8TBY9 1149 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 CCSER1Q9C0I3 900 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
VPS16-203ENST00000380469 LUC7L2Q9Y383 392 aaKnown RBP18.35■□□□□ 0.53
VPS16-203ENST00000380469 EPN1Q9Y6I3 576 aaPredicted RBP18.35■□□□□ 0.53
VPS16-203ENST00000380469 TRIM49BA6NDI0 452 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 ERLIN1O75477 346 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 BAG3O95817 575 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 ARHGAP25P42331 645 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 TXNRD3Q86VQ6 643 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 IRF2BP1Q8IU81 584 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 HNRNPLLQ8WVV9 542 aaKnown RBP18.34■□□□□ 0.53
VPS16-203ENST00000380469 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 TMEM60Q9H2L4 133 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
VPS16-203ENST00000380469 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms