RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GSDMAQ96QA5 445 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 RIOX1Q9H6W3 641 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 VWA3AA6NCI4 1184 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 DCAF8L1A6NGE4 600 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 F8W031 263 aaPredicted RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 TXLNAP40222 546 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 NOM1Q5C9Z4 860 aaKnown RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 DNTTIP2Q5QJE6 756 aaKnown RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 ISM2Q6H9L7 571 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 PDILTQ8N807 584 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 C4orf32Q8N8J7 132 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 CACTINQ8WUQ7 758 aaKnown RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 DHX58Q96C10 678 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 DHX36Q9H2U1 1008 aaKnown RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 IFNKQ9P0W0 207 aa26.27■■□□□ 1.8
VPS16-201ENST00000380443 R3HCC1Q9Y3T6 440 aaKnown RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 BAZ2BQ9UIF8 2168 aaKnown RBP26.27■■□□□ 1.8
VPS16-201ENST00000380443 WNT7AO00755 349 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 FOXN1O15353 648 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 SNHG28P0DPA3 235 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 MCM7P33993 719 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 GRIPAP1Q4V328 841 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 PAGE5Q96GU1 130 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 PRIMPOLQ96LW4 560 aa26.26■■□□□ 1.79
VPS16-201ENST00000380443 XPO4Q9C0E2 1151 aaKnown RBP26.26■■□□□ 1.79
VPS16-201ENST00000380443 TTLL1O95922 423 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 PRPHP41219 470 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 CRKP46108 304 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 SOGA3Q5TF21 947 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 TYW1BQ6NUM6 668 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 CCDC150Q8NCX0 1101 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 SUPT20HQ8NEM7 779 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 DDX4Q9NQI0 724 aaKnown RBP26.25■■□□□ 1.79
VPS16-201ENST00000380443 PRR29P0C7W0 189 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 NAPAP54920 295 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 HSD3B7Q9H2F3 369 aa26.25■■□□□ 1.79
VPS16-201ENST00000380443 PDHBP11177 359 aa26.24■■□□□ 1.79
VPS16-201ENST00000380443 BMP6P22004 513 aa26.24■■□□□ 1.79
VPS16-201ENST00000380443 LMOD1P29536 600 aaPredicted RBP26.23■■□□□ 1.79
VPS16-201ENST00000380443 SEMA3FQ13275 785 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 USP17L2Q6R6M4 530 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 A0A087X0B3 334 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 NRDCO43847 1150 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 GOLGA8HP0CJ92 632 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 AKR1B1P15121 316 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 SCNN1DP51172 638 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 DPYDQ12882 1025 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 E2F4Q16254 413 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 DTHD1Q6ZMT9 781 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 IDI2Q9BXS1 227 aa26.23■■□□□ 1.79
VPS16-201ENST00000380443 MYH8P13535 1937 aa26.22■■□□□ 1.79
VPS16-201ENST00000380443 LRMPQ12912 555 aa26.22■■□□□ 1.79
VPS16-201ENST00000380443 DACT2Q5SW24 774 aa26.22■■□□□ 1.79
VPS16-201ENST00000380443 KCND1Q9NSA2 647 aa26.22■■□□□ 1.79
VPS16-201ENST00000380443 SERPINA10Q9UK55 444 aa26.22■■□□□ 1.79
VPS16-201ENST00000380443 SMCO2A6NFE2 343 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 USP17L5A8MUK1 530 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 SERPINC1P01008 464 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 SHMT1P34896 483 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 UBASH3AP57075 661 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 NONOQ15233 471 aaKnown RBP eCLIP26.21■■□□□ 1.79
VPS16-201ENST00000380443 PPP1R18Q6NYC8 613 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 FILIP1Q7Z7B0 1213 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 MTMR7Q9Y216 660 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 ECE2O60344 883 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 GPATCH4Q5T3I0 446 aaKnown RBP26.21■■□□□ 1.79
VPS16-201ENST00000380443 AK8Q96MA6 479 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 DBNDD1Q9H9R9 158 aa26.21■■□□□ 1.79
VPS16-201ENST00000380443 MYL1P05976 194 aa26.2■■□□□ 1.78
VPS16-201ENST00000380443 DPEP1P16444 411 aa26.2■■□□□ 1.78
VPS16-201ENST00000380443 IL17AQ16552 155 aa26.2■■□□□ 1.78
VPS16-201ENST00000380443 C7orf43Q8WVR3 580 aa26.2■■□□□ 1.78
VPS16-201ENST00000380443 MXD3Q9BW11 206 aa26.2■■□□□ 1.78
VPS16-201ENST00000380443 FANCLQ9NW38 375 aa26.2■■□□□ 1.78
VPS16-201ENST00000380443 GTPBP6O43824 516 aaPredicted RBP26.19■■□□□ 1.78
VPS16-201ENST00000380443 KCNJ6P48051 423 aa26.19■■□□□ 1.78
VPS16-201ENST00000380443 CCSER1Q9C0I3 900 aa26.19■■□□□ 1.78
VPS16-201ENST00000380443 RMND1Q9NWS8 449 aa26.19■■□□□ 1.78
VPS16-201ENST00000380443 ADAMTS3O15072 1205 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 INF2Q27J81 1249 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 PDXDC2PQ6P474 469 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 TMC6Q7Z403 805 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 GRAMD1CQ8IYS0 662 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 C17orf53Q8N3J3 647 aaPredicted RBP26.18■■□□□ 1.78
VPS16-201ENST00000380443 PIGSQ96S52 555 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 GREB1LQ9C091 1923 aaPredicted RBP26.18■■□□□ 1.78
VPS16-201ENST00000380443 SKILP12757 684 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 AFMP43652 599 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 ZNF543Q08ER8 600 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 RASGRP4Q8TDF6 673 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 CUEDC2Q9H467 287 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 MAGEF1Q9HAY2 307 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 PI4KBQ9UBF8 816 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 SLX4Q8IY92 1834 aa26.18■■□□□ 1.78
VPS16-201ENST00000380443 ZNF18P17022 549 aa26.17■■□□□ 1.78
VPS16-201ENST00000380443 GPR162Q16538 588 aa26.17■■□□□ 1.78
VPS16-201ENST00000380443 PIM2Q9P1W9 311 aa26.17■■□□□ 1.78
VPS16-201ENST00000380443 ATP1A3P13637 1013 aa26.16■■□□□ 1.78
VPS16-201ENST00000380443 CHRNA5P30532 468 aa26.16■■□□□ 1.78
VPS16-201ENST00000380443 NEK8Q86SG6 692 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms