RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 TROQ12816 1431 aaPredicted RBP11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 LMNB1P20700 586 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 STAMBPL1Q96FJ0 436 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 LRGUKQ96M69 825 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 TESK2Q96S53 571 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 PSD3Q9NYI0 1048 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 UHMK1Q8TAS1 419 aaKnown RBP11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 MSH6P52701 1360 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 PGRMC1O00264 195 aaKnown RBP11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 SNX1Q13596 522 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 GDAP1Q8TB36 358 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 TFCP2Q12800 502 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 CWF19L2Q2TBE0 894 aaKnown RBP11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 ANKLE2Q86XL3 938 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 HAUS2Q9NVX0 235 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 KCNA4P22459 653 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 CRYMQ14894 314 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 EPN3Q9H201 632 aa11.46□□□□□ -0.57
CCDC85C-201ENST00000380243 ZNF449Q6P9G9 518 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 MX2P20592 715 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 CHCHD3Q9NX63 227 aaKnown RBP11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 NFU1Q9UMS0 254 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 KRT80Q6KB66 452 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 GRAMD1BQ3KR37 738 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 RAD23BP54727 409 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 KCNH5Q8NCM2 988 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 POLR3EQ9NVU0 708 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 TRAF3IP3Q9Y228 551 aa11.46□□□□□ -0.58
CCDC85C-201ENST00000380243 MAGEB6Q8N7X4 407 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 LDHCP07864 332 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 SNRPA1P09661 255 aaKnown RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 GEN1Q17RS7 908 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 CCDC138Q96M89 665 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 DIAPH2O60879 1101 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 PPP2R5BQ15173 497 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 PACSIN2Q9UNF0 486 aaPredicted RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 BCRP11274 1271 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 ARHGEF18Q6ZSZ5 1173 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 SDCCAG3Q96C92 435 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 ADAT2Q7Z6V5 191 aaKnown RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 THOC1Q96FV9 657 aaKnown RBP11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 ANXA1P04083 346 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 PHKBQ93100 1093 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 LAMB3Q13751 1172 aa11.45□□□□□ -0.58
CCDC85C-201ENST00000380243 SLCO1A2P46721 670 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 APLFQ8IW19 511 aaPredicted RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PRDM4Q9UKN5 801 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 IFNB1P01574 187 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 SLC44A4Q53GD3 710 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 NDE1Q9NXR1 346 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 TMED10P49755 219 aaKnown RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 LMNB2Q03252 620 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 RCOR1Q9UKL0 485 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 HERC4Q5GLZ8 1057 aaPredicted RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 C1orf146Q5VVC0 180 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PHACTR3Q96KR7 559 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 TMEM51Q9NW97 253 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 SLC7A5Q01650 507 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PLCB4Q15147 1175 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 RUBCNQ92622 972 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 C19orf44Q9H6X5 657 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 H2AFZP0C0S5 128 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 EEF1GP26641 437 aaKnown RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 DCUN1D2Q6PH85 259 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 H2AFVQ71UI9 128 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 NSFL1CQ9UNZ2 370 aaKnown RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 EEF1B2P24534 225 aaKnown RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PLA2G4DQ86XP0 818 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 ELAC2Q9BQ52 826 aaKnown RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 KSR1Q8IVT5 923 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PLTPP55058 493 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 NR1H3Q13133 447 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 NEK9Q8TD19 979 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PCDHA5Q9Y5H7 936 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PCDHA13Q9Y5I0 950 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 FAM210AQ96ND0 272 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 MEFVO15553 781 aaPredicted RBP11.44□□□□□ -0.58
CCDC85C-201ENST00000380243 SLC20A2Q08357 652 aa11.43□□□□□ -0.58
CCDC85C-201ENST00000380243 ZNF653Q96CK0 615 aa11.43□□□□□ -0.58
CCDC85C-201ENST00000380243 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
CCDC85C-201ENST00000380243 ARHGEF9O43307 516 aa11.43□□□□□ -0.58
CCDC85C-201ENST00000380243 CCNT1O60563 726 aaKnown RBP11.43□□□□□ -0.58
CCDC85C-201ENST00000380243 BPIFA3Q9BQP9 254 aa11.43□□□□□ -0.58
CCDC85C-201ENST00000380243 MMEP08473 750 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms