RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CT47A1Q5JQC4 288 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-202ENST00000379826 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 TRIM49BA6NDI0 452 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 BUB1O43683 1085 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 IFNAR1P17181 557 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 RASGRF1Q13972 1273 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 OR8K1Q8NGG5 319 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 FAM71BQ8TC56 605 aa12.72□□□□□ -0.37
SMAD9-202ENST00000379826 CCDC151A5D8V7 595 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 HPDP32754 393 aaPredicted RBP12.71□□□□□ -0.37
SMAD9-202ENST00000379826 PTPROQ16827 1216 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 TC2NQ8N9U0 490 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 USP17L12C9JPN9 530 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 USP17L21D6R901 530 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.37
SMAD9-202ENST00000379826 PTPREP23469 700 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 TXKP42681 527 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 C8orf74Q6P047 294 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 C2CD5Q86YS7 1000 aa12.71□□□□□ -0.37
SMAD9-202ENST00000379826 INF2Q27J81 1249 aa12.71□□□□□ -0.38
SMAD9-202ENST00000379826 KDM4FA0A1W2PPD8 638 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 H2AFXP16104 143 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 MICALCLQ6ZW33 695 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 TUBE1Q9UJT0 475 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 NCAPHQ15003 741 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 CPDO75976 1380 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 LARGE2Q8N3Y3 721 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GIMAP7Q8NHV1 300 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 IFIH1Q9BYX4 1025 aaKnown RBP12.7□□□□□ -0.38
SMAD9-202ENST00000379826 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 TCP11X2Q5H9J9 407 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 CABP7Q86V35 215 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GOLGA6L7A0A1B0GV03 622 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 TUBBP07437 444 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 CXCR5P32302 372 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 ATP1A2P50993 1020 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 GUCY2FP51841 1108 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 TPTE2Q6XPS3 522 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 EXOC4Q96A65 974 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 NYXQ9GZU5 481 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 ABHD10Q9NUJ1 306 aa12.7□□□□□ -0.38
SMAD9-202ENST00000379826 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
SMAD9-202ENST00000379826 GNGT1P63211 74 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 CHRNDQ07001 517 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 NLRP10Q86W26 655 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 ANKRD13CQ8N6S4 541 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 SF3A3Q12874 501 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMAD9-202ENST00000379826 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 PICALMQ13492 652 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 SCG2P13521 617 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 TNNI2P48788 182 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 LIG3P49916 1009 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 CFAP58Q5T655 872 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 RAD9BQ6WBX8 426 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 TRIM10Q9UDY6 481 aa12.69□□□□□ -0.38
SMAD9-202ENST00000379826 MYO1CO00159 1063 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 NMT2O60551 498 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 ZNF76P36508 570 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 TECP42680 631 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 VAV2P52735 878 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 BLIDQ8IZY5 108 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 OTUD6BQ8N6M0 293 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
SMAD9-202ENST00000379826 MAP3K14Q99558 947 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
SMAD9-202ENST00000379826 NDUFA10O95299 355 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 LIFRP42702 1097 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 CCT5P48643 541 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 ZNF658Q5TYW1 1059 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-202ENST00000379826 KCTD16Q68DU8 428 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 TRIM66O15016 1216 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 RFX1P22670 979 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 IRX3P78415 501 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-202ENST00000379826 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
SMAD9-202ENST00000379826 ZFYVE27Q5T4F4 411 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms