RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.53□□□□□ -0.08
HIPK3-202ENST00000379016 GFAPP14136 432 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 PDE1BQ01064 536 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 SLC8A2Q9UPR5 921 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 IQANK1A0A1B0GTG1 560 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 POLR2BP30876 1174 aaKnown RBP14.52□□□□□ -0.08
HIPK3-202ENST00000379016 KIF19Q2TAC6 998 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 SLITRK6Q9H5Y7 841 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 COPG1Q9Y678 874 aaKnown RBP14.52□□□□□ -0.08
HIPK3-202ENST00000379016 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.082e-6■■■■□ 25.3
HIPK3-202ENST00000379016 SLMAPQ14BN4 828 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 LRRC8CQ8TDW0 803 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 TTC25Q96NG3 672 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 RAB17Q9H0T7 212 aa14.52□□□□□ -0.08
HIPK3-202ENST00000379016 CFLARO15519 480 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 EPHB1P54762 984 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 TMTC3Q6ZXV5 915 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 MLXIPQ9HAP2 919 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 SGK1O00141 431 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 ZNF18P17022 549 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 NSUN2Q08J23 767 aaKnown RBP eCLIP14.52□□□□□ -0.09
HIPK3-202ENST00000379016 LVRNQ6Q4G3 990 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 NSMFQ6X4W1 530 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 TBC1D9Q6ZT07 1266 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 TSR3Q9UJK0 312 aaKnown RBP14.52□□□□□ -0.09
HIPK3-202ENST00000379016 STRIP2Q9ULQ0 834 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 CLCA2Q9UQC9 943 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 GOLGA8QA0A0J9YX86 632 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 GOLGA8OA6NCC3 632 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 GOLGA8NF8WBI6 632 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 MECOMQ03112 1051 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 GADL1Q6ZQY3 521 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 TPH2Q8IWU9 490 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 DEPTORQ8TB45 409 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 PHF21AQ96BD5 680 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 NYXQ9GZU5 481 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 PRDM5Q9NQX1 630 aaPredicted RBP14.52□□□□□ -0.09
HIPK3-202ENST00000379016 ZKSCAN5Q9Y2L8 839 aa14.52□□□□□ -0.09
HIPK3-202ENST00000379016 NCF2P19878 526 aaPredicted RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 CYP2J2P51589 502 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 PDXDC1Q6P996 788 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 TEX13AQ9BXU3 409 aaPredicted RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 NBPF20Q3BBV1 942 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 NBPF10Q6P3W6 841 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 IFIH1Q9BYX4 1025 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 LARSQ9P2J5 1176 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 DNM3Q9UQ16 869 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 CTNNA1P35221 906 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 DDIT3P35638 169 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 POLE2P56282 527 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 YWHAEP62258 255 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 MRPL28Q13084 256 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 CSRNP1Q96S65 589 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 A0A1B0GVL5 298 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 KRT7P08729 469 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 PAK2Q13177 524 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 TTC19Q6DKK2 380 aaPredicted RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 CDKL2Q92772 493 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 GCNAQ96QF7 691 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 PHF8Q9UPP1 1060 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 RBM8AQ9Y5S9 174 aaKnown RBP14.51□□□□□ -0.09
HIPK3-202ENST00000379016 BRD1O95696 1058 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 INHBAP08476 426 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 BBS5Q8N3I7 341 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 TMC2Q8TDI7 906 aa14.51□□□□□ -0.09
HIPK3-202ENST00000379016 E2F6O75461 281 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CFBP00751 764 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CFAP221Q4G0U5 840 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 HPS4Q9NQG7 708 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 RTEL1Q9NZ71 1219 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 MAP10Q9P2G4 905 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 PA2G4Q9UQ80 394 aaKnown RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 KLHL30Q0D2K2 578 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 HERC4Q5GLZ8 1057 aaPredicted RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 FBXO31Q5XUX0 539 aaPredicted RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 ATG16L1Q676U5 607 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 PIK3AP1Q6ZUJ8 805 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 TRIML2Q8N7C3 387 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CHCHD3Q9NX63 227 aaKnown RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 TNNC2P02585 160 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 PCYT1AP49585 367 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 YWHAGP61981 247 aaKnown RBP eCLIP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CROCCP2Q86T23 111 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 DNAAF3Q8N9W5 541 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 TRPC5Q9UL62 973 aaPredicted RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 POLR2DO15514 142 aaKnown RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 KRT8P05787 483 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 PMLP29590 882 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 CENPAP49450 140 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 TYW1BQ6NUM6 668 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 ARMC2Q8NEN0 867 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 MAIP1Q8WWC4 291 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 PCDHB13Q9Y5F0 798 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 SLC9A1P19634 815 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 SH3BGRP55822 239 aaPredicted RBP14.5□□□□□ -0.09
HIPK3-202ENST00000379016 ADCY1Q08828 1119 aa14.5□□□□□ -0.09
HIPK3-202ENST00000379016 MTMR3Q13615 1198 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms