RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PHF20Q9BVI0 1012 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 CXorf56Q9H5V9 222 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ACTR5Q9H9F9 607 aaPredicted RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 GUCA1BQ9UMX6 200 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 GRIN2DO15399 1336 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ADAMTSL3P82987 1691 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 RIC1Q4ADV7 1423 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 CHUKO15111 745 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 MEFVO15553 781 aaPredicted RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 LONP1P36776 959 aaKnown RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 VAV2P52735 878 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 HERVK_113P62684 666 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 UBXN1Q04323 297 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 KIF5AQ12840 1032 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 MFSD6Q6ZSS7 791 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ANKRD18AQ8IVF6 992 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ARFGAP2Q8N6H7 521 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 NELFBQ8WX92 580 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 MAGEC2Q9UBF1 373 aaPredicted RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 SNX12Q9UMY4 172 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ABCB11O95342 1321 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 PLCH1Q4KWH8 1693 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 TCRBV5S4A2TA0A5A2 114 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 LCA5LO95447 670 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ATP1A1P05023 1023 aaKnown RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 SRGNP10124 158 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 MNAT1P51948 309 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 GNGT1P63211 74 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 COBLL1Q53SF7 1204 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 HSP90AA4PQ58FG1 418 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ARMC9Q7Z3E5 817 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 OTUD6BQ8N6M0 293 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 FANCBQ8NB91 859 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 SECISBP2LQ93073 1101 aaKnown RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 AIDAQ96BJ3 306 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 DHTKD1Q96HY7 919 aaPredicted RBP9.18□□□□□ -0.94
PTPRR-203ENST00000378778 ALS2CR12Q96Q35 445 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 EDEM3Q9BZQ6 932 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 NAPBQ9H115 298 aa9.18□□□□□ -0.94
PTPRR-203ENST00000378778 LRP5O75197 1615 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ZNF142P52746 1687 aaPredicted RBP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 BICDL2A1A5D9 508 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 PARP1P09874 1014 aaKnown RBP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 PDE6AP16499 860 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 SMTNP53814 917 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 HSPA2P54652 639 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 CABP4P57796 275 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 GRIN1Q05586 938 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 IFIT5Q13325 482 aaKnown RBP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 PPP4R3AQ6IN85 833 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 KLHL10Q6JEL2 608 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 PDXDC2PQ6P474 469 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 IFNL3Q8IZI9 196 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ZNF622Q969S3 477 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 CCDC47Q96A33 483 aaKnown RBP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 EPN3Q9H201 632 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ZSWIM5Q9P217 1185 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ANAPC4Q9UJX5 808 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 HYOU1Q9Y4L1 999 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 CEP83Q9Y592 693 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 HMGB1P1B2RPK0 211 aaPredicted RBP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ERVV-2B6SEH9 535 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ADORA1P30542 326 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 PAFAH1B1P43034 410 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 FNTAP49354 379 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 STX17P56962 302 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 TCIRG1Q13488 830 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 SPA17Q15506 151 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 PTPN21Q16825 1174 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 FOXR2Q6PJQ5 311 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 IFT20Q8IY31 132 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 GRAMD1CQ8IYS0 662 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ADSSL1Q8N142 457 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 RNF10Q8N5U6 811 aaKnown RBP9.17□□□□□ -0.94
PTPRR-203ENST00000378778 TTYH3Q9C0H2 523 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 CABP5Q9NP86 173 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 STIM2Q9P246 746 aa9.17□□□□□ -0.94
PTPRR-203ENST00000378778 ANKRD36CQ5JPF3 1778 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 MEGF6O75095 1541 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 ZNF532Q9HCE3 1301 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 GOLGA6L7A0A1B0GV03 622 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 GRID2IPA4D2P6 1211 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 NUTM2BA6NNL0 878 aaPredicted RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 NUTM2EB1AL46 878 aaPredicted RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 PSMA7O14818 248 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 PJA2O43164 708 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 RPN1P04843 607 aaKnown RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 APPP05067 770 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 MCAMP43121 646 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 IFFO1Q0D2I5 559 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 MAP3K12Q12852 859 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 TTC38Q5R3I4 469 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms