RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 ZRANB2O95218 330 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 RPN1P04843 607 aaKnown RBP22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 LONP1P36776 959 aaKnown RBP22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 DIXDC1Q155Q3 683 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 DGKHQ86XP1 1220 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 VPS16Q9H269 839 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 MAPK8IP1Q9UQF2 711 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 ZPR1O75312 459 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 PNMA6AP0CW24 399 aaPredicted RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 BMS1Q14692 1282 aaKnown RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 ZNF658Q5TYW1 1059 aaPredicted RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 WWC2Q6AWC2 1192 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 SH3GLB2Q9NR46 395 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 MTMR7Q9Y216 660 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 NHSQ6T4R5 1651 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 RNF225M0QZC1 329 aaPredicted RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 CYTH3O43739 400 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 COPB1P53618 953 aaKnown RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 SPTY2D1Q68D10 685 aaPredicted RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 TPTE2Q6XPS3 522 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 RASGRP2Q7LDG7 609 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 PYM1Q9BRP8 204 aaKnown RBP22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 TMEM60Q9H2L4 133 aa22.05■■□□□ 1.12
SHROOM1-202ENST00000378676 SEC31AO94979 1220 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 LDHBP07195 334 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 FECHP22830 423 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 STAT6P42226 847 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 NAALADL2Q58DX5 795 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 TEX35Q5T0J7 233 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 MEX3CQ5U5Q3 659 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 RSRC2Q7L4I2 434 aaKnown RBP22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 ANKS1AQ92625 1134 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 GPR101Q96P66 508 aaPredicted RBP22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 PCDHA6Q9UN73 950 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 PCDHA8Q9Y5H6 950 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 N4BP3O15049 544 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 PRCPP42785 496 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 DISC1Q9NRI5 854 aa22.04■■□□□ 1.12
SHROOM1-202ENST00000378676 KCNJ18B7U540 433 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 ERVK-24P63145 666 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 KCNJ12Q14500 433 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 CNGA4Q8IV77 575 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 ACRBPQ8NEB7 543 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 ARGLU1Q9NWB6 273 aaPredicted RBP22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 TRIM49BA6NDI0 452 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 TCP11X2Q5H9J9 407 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 TMCO3Q6UWJ1 677 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 MKNK2Q9HBH9 465 aa22.03■■□□□ 1.12
SHROOM1-202ENST00000378676 LY75O60449 1722 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 CCDC194A0A1B0GVG4 234 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 LRRC10BA6NIK2 292 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 TXLNAP40222 546 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 PLA2G4AP47712 749 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 TERF2Q15554 542 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 INF2Q27J81 1249 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 TMED8Q6PL24 325 aaPredicted RBP22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 LRRC15Q8TF66 581 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 RMND1Q9NWS8 449 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
SHROOM1-202ENST00000378676 STXBP3O00186 592 aa22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 NFIXQ14938 502 aa22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 HEATR3Q7Z4Q2 680 aa22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 TGFBRAP1Q8WUH2 860 aa22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 ARHGEF1Q92888 912 aaKnown RBP22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 ABHD10Q9NUJ1 306 aa22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 ANKIB1Q9P2G1 1089 aa22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 SAP30BPQ9UHR5 308 aaKnown RBP22.02■■□□□ 1.11
SHROOM1-202ENST00000378676 TSPY3P0CV98 308 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 TSPY8P0CW00 308 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 CREBRFQ8IUR6 639 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 CCDC51Q96ER9 411 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 PLIN2Q99541 437 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 CPVLQ9H3G5 476 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 ABL1P00519 1130 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 GOLGA8HP0CJ92 632 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 SPAG1Q07617 926 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 ZNF771Q7L3S4 317 aaPredicted RBP22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 IRF2BP1Q8IU81 584 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 MAPKAPK5Q8IW41 473 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 DAGLBQ8NCG7 672 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 WDR66Q8TBY9 1149 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 TMEM47Q9BQJ4 181 aa22.01■■□□□ 1.11
SHROOM1-202ENST00000378676 ZBTB22O15209 634 aa22■■□□□ 1.11
SHROOM1-202ENST00000378676 TPM1P09493 284 aa22■■□□□ 1.11
SHROOM1-202ENST00000378676 PMS1P54277 932 aaKnown RBP22■■□□□ 1.11
SHROOM1-202ENST00000378676 DTHD1Q6ZMT9 781 aa22■■□□□ 1.11
SHROOM1-202ENST00000378676 KLRC4O43908 158 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 RASA1P20936 1047 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 TAF3Q5VWG9 929 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 ADSSL1Q8N142 457 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 BARHL2Q9NY43 387 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 STX8Q9UNK0 236 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 GNAQP50148 359 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 FAM182BQ5T319 152 aa21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 GPR161Q8N6U8 529 aaKnown RBP21.99■■□□□ 1.11
SHROOM1-202ENST00000378676 PALM3A6NDB9 673 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 GRAPQ13588 217 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms