RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DAAM2Q86T65 1068 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 PSMB7Q99436 277 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 GAS7O60861 476 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 COBLO75128 1261 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 FERP16591 822 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 STRN3Q13033 797 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 SLFN13Q68D06 897 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 GRAMD1CQ8IYS0 662 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
NPHP4-201ENST00000378156 INO80Q9ULG1 1556 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-201ENST00000378156 TNFAIP3P21580 790 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-201ENST00000378156 SEPT12Q8IYM1 358 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 SMC6Q96SB8 1091 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-201ENST00000378156 EXOC3O60645 756 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
NPHP4-201ENST00000378156 CCDC50Q8IVM0 306 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 IL25Q9H293 177 aa16.65■□□□□ 0.26
NPHP4-201ENST00000378156 MRPL44Q9H9J2 332 aaKnown RBP16.65■□□□□ 0.26
NPHP4-201ENST00000378156 CPS1P31327 1500 aa16.64■□□□□ 0.26
NPHP4-201ENST00000378156 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 ZEB2O60315 1214 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 GCNT3O95395 438 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 TECP42680 631 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 KCNJ12Q14500 433 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 ARID5BQ14865 1188 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 TPH2Q8IWU9 490 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 LCORLQ8N3X6 602 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 FMNL1O95466 1100 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-201ENST00000378156 OR52Z1P0C646 297 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 MORC3Q14149 939 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 BRDTQ58F21 947 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-201ENST00000378156 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 KIFAP3Q92845 792 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 TSNARE1Q96NA8 513 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 SAMD15Q9P1V8 674 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-201ENST00000378156 ATP2A1O14983 1001 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 KRT5P13647 590 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 RASGRF1Q13972 1273 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 SPATA1Q5VX52 437 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 DCAF15Q66K64 600 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 APBB1IPQ7Z5R6 666 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-201ENST00000378156 TNNC1P63316 161 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 SECISBP2LQ93073 1101 aaKnown RBP16.64■□□□□ 0.25
NPHP4-201ENST00000378156 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
NPHP4-201ENST00000378156 FAM207AQ9NSI2 230 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-201ENST00000378156 KDM3AQ9Y4C1 1321 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 FOXP1Q9H334 677 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-201ENST00000378156 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 RXRBP28702 533 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 MCAMP43121 646 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 PRR16Q569H4 304 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-201ENST00000378156 STIM2Q9P246 746 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
NPHP4-201ENST00000378156 CSADQ9Y600 493 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 IKBKBO14920 756 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 ALAS1P13196 640 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 MAGEA1P43355 309 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 MXRA7P84157 204 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
NPHP4-201ENST00000378156 SMYD4Q8IYR2 804 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-201ENST00000378156 OR8K1Q8NGG5 319 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 GINS2Q9Y248 185 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 ZBTB16Q05516 673 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
NPHP4-201ENST00000378156 SYNE4Q8N205 404 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 MTUS1Q9ULD2 1270 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 STX10O60499 249 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 ATP1A3P13637 1013 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 LACTBP83111 547 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-201ENST00000378156 ASIC2Q16515 512 aa16.62■□□□□ 0.25
NPHP4-201ENST00000378156 IFNAR1P17181 557 aa16.61■□□□□ 0.25
NPHP4-201ENST00000378156 OAS2P29728 719 aaKnown RBP16.61■□□□□ 0.25
NPHP4-201ENST00000378156 SETDB1Q15047 1291 aa16.61■□□□□ 0.25
NPHP4-201ENST00000378156 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
NPHP4-201ENST00000378156 SNAP23O00161 211 aa16.61■□□□□ 0.25
NPHP4-201ENST00000378156 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
NPHP4-201ENST00000378156 MTRF1LQ9UGC7 380 aaKnown RBP16.61■□□□□ 0.25
NPHP4-201ENST00000378156 MMP1P03956 469 aa16.61■□□□□ 0.25
NPHP4-201ENST00000378156 POLR2MP0CAP2 368 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms