RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 KRT18P05783 430 aaKnown RBP12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 ITPK1Q13572 414 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 PDIA6Q15084 440 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 CAMK4Q16566 473 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 ELOA2Q8IYF1 753 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 NME8Q8N427 588 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 SCLT1Q96NL6 688 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 H3BQF6 201 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 FUT4P22083 530 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 TXLNAP40222 546 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 SDR42E1Q8WUS8 393 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 WASF1Q92558 559 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZKSCAN4Q969J2 545 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 KRT23Q9C075 422 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 TTF2Q9UNY4 1162 aaKnown RBP12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 COL15A1P39059 1388 aa12.14□□□□□ -0.47
PCDHGA1-201ENST00000378105 H7C1W4 665 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 STX6O43752 255 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 IQCGQ9H095 443 aaKnown RBP12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 MCM8Q9UJA3 840 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZNF804BA4D1E1 1349 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZSCAN9O15535 394 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 RASA3Q14644 834 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
PCDHGA1-201ENST00000378105 PTH1RQ03431 593 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 DEFB132Q7Z7B7 95 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZNF408Q9H9D4 720 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 HDAC6Q9UBN7 1215 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 SLC27A2O14975 620 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 C21orf2O43822 256 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CSPG5O95196 566 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CD151P48509 253 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CCT5P48643 541 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CRYMQ14894 314 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZYXQ15942 572 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 GPR162Q16538 588 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 RTN1Q16799 776 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 EPAS1Q99814 870 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 TNMDQ9H2S6 317 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 ADCY9O60503 1353 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 PDE6AP16499 860 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CYP11B2P19099 503 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CDR1P51861 262 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 TTC30BQ8N4P2 665 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 CLIC6Q96NY7 704 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 TRIM5Q9C035 493 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 HELLSQ9NRZ9 838 aa12.12□□□□□ -0.47
PCDHGA1-201ENST00000378105 MYH7P12883 1935 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 GNAT2P19087 354 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 KIF5BP33176 963 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 CLCN2P51788 898 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 FAN1Q9Y2M0 1017 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 PLCG2P16885 1265 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 IRF5Q13568 498 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 SLC5A9Q2M3M2 681 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 PDE11AQ9HCR9 933 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 NFIXQ14938 502 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 SFMBT2Q5VUG0 894 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 USP17L21D6R901 530 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZNF24P17028 368 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 ENOX2Q16206 610 aaKnown RBP12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 PDILTQ8N807 584 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 ALG1Q9BT22 464 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 BRD8Q9H0E9 1235 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
PCDHGA1-201ENST00000378105 REV3LO60673 3130 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms