RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 DIS3L2Q8IYB7 885 aaKnown RBP24.27■■□□□ 1.48
RNF38-205ENST00000377877 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.27■■□□□ 1.48
RNF38-205ENST00000377877 PRPF40AO75400 957 aaKnown RBP24.27■■□□□ 1.48
RNF38-205ENST00000377877 U2AF2P26368 475 aaKnown RBP eCLIP24.27■■□□□ 1.483e-6■■■□□ 16.8
RNF38-205ENST00000377877 SPP2Q13103 211 aa24.27■■□□□ 1.48
RNF38-205ENST00000377877 NR5A1Q13285 461 aa24.27■■□□□ 1.48
RNF38-205ENST00000377877 HEATR3Q7Z4Q2 680 aa24.27■■□□□ 1.48
RNF38-205ENST00000377877 PICK1Q9NRD5 415 aa24.27■■□□□ 1.48
RNF38-205ENST00000377877 LMBRD1Q9NUN5 540 aa24.27■■□□□ 1.48
RNF38-205ENST00000377877 DCAF8L1A6NGE4 600 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 XBP1P17861 261 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 MAP3K9P80192 1104 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 MTMR8Q96EF0 704 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 FEZ1Q99689 392 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 SH2D4AQ9H788 454 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 NMRK2Q9NPI5 230 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 ZHX2Q9Y6X8 837 aa24.26■■□□□ 1.47
RNF38-205ENST00000377877 STXBP3O00186 592 aa24.25■■□□□ 1.47
RNF38-205ENST00000377877 PPP1R12BO60237 982 aaPredicted RBP24.25■■□□□ 1.47
RNF38-205ENST00000377877 SNAP25P60880 206 aa24.25■■□□□ 1.47
RNF38-205ENST00000377877 ZNF526Q8TF50 670 aaPredicted RBP24.25■■□□□ 1.47
RNF38-205ENST00000377877 FTOQ9C0B1 505 aaKnown RBP eCLIP24.25■■□□□ 1.47
RNF38-205ENST00000377877 BARHL2Q9NY43 387 aa24.25■■□□□ 1.47
RNF38-205ENST00000377877 TRAF5O00463 557 aa24.25■■□□□ 1.47
RNF38-205ENST00000377877 PPP1R11O60927 126 aaPredicted RBP24.25■■□□□ 1.47
RNF38-205ENST00000377877 NOL9Q5SY16 702 aaKnown RBP24.25■■□□□ 1.47
RNF38-205ENST00000377877 WDR18Q9BV38 432 aa24.25■■□□□ 1.47
RNF38-205ENST00000377877 KIAA1683Q9H0B3 1180 aa24.25■■□□□ 1.47
RNF38-205ENST00000377877 SEC63Q9UGP8 760 aaKnown RBP24.25■■□□□ 1.47
RNF38-205ENST00000377877 FIBPO43427 364 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 NLRP5P59047 1200 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 VGLL4Q14135 290 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 SAFBQ15424 915 aaKnown RBP eCLIP24.24■■□□□ 1.47
RNF38-205ENST00000377877 BTNL9Q6UXG8 535 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 COA7Q96BR5 231 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 PANK2Q9BZ23 570 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 SH3GLB2Q9NR46 395 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 EMILIN3Q9NT22 766 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 SNCAIPQ9Y6H5 919 aa24.24■■□□□ 1.47
RNF38-205ENST00000377877 PNMA6FA0A0J9YX94 578 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 CEBPZQ03701 1054 aaKnown RBP24.23■■□□□ 1.47
RNF38-205ENST00000377877 MTMR2Q13614 643 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 BRAPQ7Z569 592 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 PHIPQ8WWQ0 1821 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 IKQ13123 557 aaPredicted RBP24.23■■□□□ 1.47
RNF38-205ENST00000377877 GNL2Q13823 731 aaKnown RBP24.23■■□□□ 1.47
RNF38-205ENST00000377877 NOM1Q5C9Z4 860 aaKnown RBP24.23■■□□□ 1.47
RNF38-205ENST00000377877 MYSM1Q5VVJ2 828 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 ZNF280CQ8ND82 737 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 USP28Q96RU2 1077 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 MYH15Q9Y2K3 1946 aa24.23■■□□□ 1.47
RNF38-205ENST00000377877 TRIM75PA6NK02 468 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 KRT85P78386 507 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 EARS2Q5JPH6 523 aaKnown RBP24.22■■□□□ 1.47
RNF38-205ENST00000377877 SYDE2Q5VT97 1194 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 CNKSR2Q8WXI2 1034 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 FOXP1Q9H334 677 aaPredicted RBP24.22■■□□□ 1.47
RNF38-205ENST00000377877 FBXO28Q9NVF7 368 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 PRR12Q9ULL5 1215 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 ZBTB5O15062 677 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 NF2P35240 595 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 BACE1P56817 501 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 NOSTRINQ8IVI9 506 aa24.22■■□□□ 1.47
RNF38-205ENST00000377877 FAM205CA6NFA0 338 aa24.21■■□□□ 1.47
RNF38-205ENST00000377877 GADD45BO75293 160 aaPredicted RBP24.21■■□□□ 1.47
RNF38-205ENST00000377877 KRT2P35908 639 aa24.21■■□□□ 1.47
RNF38-205ENST00000377877 QRICH1Q2TAL8 776 aa24.21■■□□□ 1.47
RNF38-205ENST00000377877 CLMNQ96JQ2 1002 aa24.21■■□□□ 1.47
RNF38-205ENST00000377877 AFG3L2Q9Y4W6 797 aa24.21■■□□□ 1.47
RNF38-205ENST00000377877 IREB2P48200 963 aaKnown RBP24.2■■□□□ 1.46
RNF38-205ENST00000377877 STAT2P52630 851 aa24.2■■□□□ 1.46
RNF38-205ENST00000377877 NAPAP54920 295 aa24.2■■□□□ 1.46
RNF38-205ENST00000377877 TTLL12Q14166 644 aaPredicted RBP24.2■■□□□ 1.46
RNF38-205ENST00000377877 TNFRSF25Q93038 417 aa24.2■■□□□ 1.46
RNF38-205ENST00000377877 AS3MTQ9HBK9 375 aa24.2■■□□□ 1.46
RNF38-205ENST00000377877 OTOFQ9HC10 1997 aa24.2■■□□□ 1.46
RNF38-205ENST00000377877 CDC37Q16543 378 aaPredicted RBP24.2■■□□□ 1.46
RNF38-205ENST00000377877 RRAGDQ9NQL2 400 aaPredicted RBP24.2■■□□□ 1.46
RNF38-205ENST00000377877 PAPPA2Q9BXP8 1791 aa24.19■■□□□ 1.46
RNF38-205ENST00000377877 TOB1P50616 345 aaPredicted RBP24.19■■□□□ 1.46
RNF38-205ENST00000377877 LEO1Q8WVC0 666 aaPredicted RBP24.19■■□□□ 1.46
RNF38-205ENST00000377877 ZNF396Q96N95 335 aaPredicted RBP24.19■■□□□ 1.46
RNF38-205ENST00000377877 PCDHA4Q9UN74 947 aa24.19■■□□□ 1.46
RNF38-205ENST00000377877 CLIC4Q9Y696 253 aa24.19■■□□□ 1.46
RNF38-205ENST00000377877 SMCHD1A6NHR9 2005 aa24.19■■□□□ 1.46
RNF38-205ENST00000377877 SMCO2A6NFE2 343 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 SAMD1Q6SPF0 538 aaPredicted RBP24.18■■□□□ 1.46
RNF38-205ENST00000377877 BLIDQ8IZY5 108 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 TMEM87AQ8NBN3 555 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 RASGRP4Q8TDF6 673 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 LPAR1Q92633 364 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 KIFC2Q96AC6 838 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 ZMYND12Q9H0C1 365 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 ELP3Q9H9T3 547 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 CSADQ9Y600 493 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 VCAM1P19320 739 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 HMGCS2P54868 508 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 MAP3K11Q16584 847 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 KLHL40Q2TBA0 621 aa24.18■■□□□ 1.46
RNF38-205ENST00000377877 TPRNQ4KMQ1 711 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms