RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 F5H6K3 240 aa22.89■■□□□ 1.25
CBWD3-204ENST00000377349 M0R2C6 588 aa22.89■■□□□ 1.25
CBWD3-204ENST00000377349 RNF113AO15541 343 aaKnown RBP22.89■■□□□ 1.25
CBWD3-204ENST00000377349 GPAA1O43292 621 aa22.89■■□□□ 1.25
CBWD3-204ENST00000377349 COPB2P35606 906 aa22.89■■□□□ 1.25
CBWD3-204ENST00000377349 KLRC3Q07444 240 aa22.89■■□□□ 1.25
CBWD3-204ENST00000377349 SHHQ15465 462 aa22.89■■□□□ 1.25
CBWD3-204ENST00000377349 OTUD7AQ8TE49 926 aaPredicted RBP22.89■■□□□ 1.25
CBWD3-204ENST00000377349 PRDM5Q9NQX1 630 aaPredicted RBP22.89■■□□□ 1.25
CBWD3-204ENST00000377349 MINDY4BA8MYZ0 360 aa22.88■■□□□ 1.25
CBWD3-204ENST00000377349 PGK1P00558 417 aa22.88■■□□□ 1.25
CBWD3-204ENST00000377349 RARBP10826 455 aa22.88■■□□□ 1.25
CBWD3-204ENST00000377349 BADQ92934 168 aa22.88■■□□□ 1.25
CBWD3-204ENST00000377349 TEX13BQ9BXU2 312 aa22.88■■□□□ 1.25
CBWD3-204ENST00000377349 DNAJC25-GNG10A0A024R161 153 aa22.87■■□□□ 1.25
CBWD3-204ENST00000377349 ADAMTS4O75173 837 aa22.87■■□□□ 1.25
CBWD3-204ENST00000377349 ITGB8P26012 769 aa22.87■■□□□ 1.25
CBWD3-204ENST00000377349 TLE2Q04725 743 aa22.87■■□□□ 1.25
CBWD3-204ENST00000377349 MKNK2Q9HBH9 465 aa22.87■■□□□ 1.25
CBWD3-204ENST00000377349 LCTP09848 1927 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 ATP2A1O14983 1001 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 ERC2O15083 957 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 PRDM1O75626 825 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 SNAI1O95863 264 aaPredicted RBP22.86■■□□□ 1.25
CBWD3-204ENST00000377349 APPP05067 770 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 ANKRD45Q5TZF3 282 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 SNRNP48Q6IEG0 339 aaKnown RBP22.86■■□□□ 1.25
CBWD3-204ENST00000377349 MKL1Q969V6 931 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 FSD1Q9BTV5 496 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 CLIP2Q9UDT6 1046 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 PLIN4Q96Q06 1357 aa22.86■■□□□ 1.25
CBWD3-204ENST00000377349 ZFYP08048 801 aaPredicted RBP22.85■■□□□ 1.25
CBWD3-204ENST00000377349 AKR1A1P14550 325 aa22.85■■□□□ 1.25
CBWD3-204ENST00000377349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.85■■□□□ 1.25
CBWD3-204ENST00000377349 PRPF38AQ8NAV1 312 aaKnown RBP22.85■■□□□ 1.25
CBWD3-204ENST00000377349 CEP95Q96GE4 821 aa22.85■■□□□ 1.25
CBWD3-204ENST00000377349 FGD4Q96M96 766 aa22.85■■□□□ 1.25
CBWD3-204ENST00000377349 A0A1W2PQ45 241 aaPredicted RBP22.84■■□□□ 1.25
CBWD3-204ENST00000377349 A0A1W2PQY0 241 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 MX1P20591 662 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 MAMDC4Q6UXC1 1216 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 RNF180Q86T96 592 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 MSL3Q8N5Y2 521 aaKnown RBP22.84■■□□□ 1.25
CBWD3-204ENST00000377349 MTMR4Q9NYA4 1195 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 LRRC37A2A6NM11 1700 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 TTC41PQ6P2S7 1318 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 SYNGAP1Q96PV0 1343 aa22.84■■□□□ 1.25
CBWD3-204ENST00000377349 SPTBN5Q9NRC6 3674 aaKnown RBP22.84■■□□□ 1.25
CBWD3-204ENST00000377349 GNAT2P19087 354 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 TDO2P48775 406 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 CCSAPQ6IQ19 270 aaPredicted RBP22.83■■□□□ 1.25
CBWD3-204ENST00000377349 IFNL3Q8IZI9 196 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 PI4K2BQ8TCG2 481 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 FAM161BQ96MY7 647 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 SEC62Q99442 399 aaKnown RBP22.83■■□□□ 1.25
CBWD3-204ENST00000377349 SLC38A10Q9HBR0 1119 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 SYNRGQ9UMZ2 1314 aa22.83■■□□□ 1.25
CBWD3-204ENST00000377349 PATL2C9JE40 543 aaKnown RBP22.82■■□□□ 1.24
CBWD3-204ENST00000377349 LRRFIP1Q32MZ4 808 aaKnown RBP22.82■■□□□ 1.24
CBWD3-204ENST00000377349 KLHDC9Q8NEP7 349 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 SYNPO2Q9UMS6 1093 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 CNPY2Q9Y2B0 182 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 KIAA0355O15063 1070 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 ADCY6O43306 1168 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 CLTBP09497 229 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 EPHB4P54760 987 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 ZNF467Q7Z7K2 595 aaPredicted RBP22.82■■□□□ 1.24
CBWD3-204ENST00000377349 CPXCR1Q8N123 301 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 LRRC47Q8N1G4 583 aaKnown RBP22.82■■□□□ 1.24
CBWD3-204ENST00000377349 GMCL1P1Q8NEA9 526 aa22.82■■□□□ 1.24
CBWD3-204ENST00000377349 RAVER2Q9HCJ3 691 aaKnown RBP22.82■■□□□ 1.24
CBWD3-204ENST00000377349 MYADML2A6NDP7 307 aa22.81■■□□□ 1.24
CBWD3-204ENST00000377349 FOXP2O15409 715 aa22.81■■□□□ 1.24
CBWD3-204ENST00000377349 IRX5P78411 483 aaPredicted RBP22.81■■□□□ 1.24
CBWD3-204ENST00000377349 ZNF444Q8N0Y2 327 aaPredicted RBP22.81■■□□□ 1.24
CBWD3-204ENST00000377349 NEDD1Q8NHV4 660 aa22.81■■□□□ 1.24
CBWD3-204ENST00000377349 KIFC2Q96AC6 838 aa22.81■■□□□ 1.24
CBWD3-204ENST00000377349 TSEN34Q9BSV6 310 aaKnown RBP22.81■■□□□ 1.24
CBWD3-204ENST00000377349 TACC3Q9Y6A5 838 aa22.81■■□□□ 1.24
CBWD3-204ENST00000377349 TTLL1O95922 423 aa22.8■■□□□ 1.24
CBWD3-204ENST00000377349 ACLYP53396 1101 aa22.8■■□□□ 1.24
CBWD3-204ENST00000377349 ZNF697Q5TEC3 545 aa22.8■■□□□ 1.24
CBWD3-204ENST00000377349 DDX11Q96FC9 970 aa22.8■■□□□ 1.24
CBWD3-204ENST00000377349 FEM1BQ9UK73 627 aa22.8■■□□□ 1.24
CBWD3-204ENST00000377349 PQBP1O60828 265 aaKnown RBP22.79■■□□□ 1.24
CBWD3-204ENST00000377349 ZBED4O75132 1171 aa22.79■■□□□ 1.24
CBWD3-204ENST00000377349 ANKRD33Q7Z3H0 272 aa22.79■■□□□ 1.24
CBWD3-204ENST00000377349 ZNF287Q9HBT7 754 aa22.79■■□□□ 1.24
CBWD3-204ENST00000377349 FAM184BQ9ULE4 1060 aa22.79■■□□□ 1.24
CBWD3-204ENST00000377349 DUSP11O75319 330 aaKnown RBP22.78■■□□□ 1.24
CBWD3-204ENST00000377349 OAZ1P54368 228 aa22.78■■□□□ 1.24
CBWD3-204ENST00000377349 SMAD3P84022 425 aaKnown RBP22.78■■□□□ 1.24
CBWD3-204ENST00000377349 FAAP100Q0VG06 881 aa22.78■■□□□ 1.24
CBWD3-204ENST00000377349 ZMYM1Q5SVZ6 1142 aa22.78■■□□□ 1.24
CBWD3-204ENST00000377349 KATNBL1Q9H079 304 aa22.78■■□□□ 1.24
CBWD3-204ENST00000377349 TTYH1Q9H313 450 aaPredicted RBP22.78■■□□□ 1.24
CBWD3-204ENST00000377349 SEMA6BQ9H3T3 888 aa22.78■■□□□ 1.24
CBWD3-204ENST00000377349 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.78■■□□□ 1.24
CBWD3-204ENST00000377349 ZHX1Q9UKY1 873 aaPredicted RBP22.78■■□□□ 1.24
CBWD3-204ENST00000377349 TTC28Q96AY4 2481 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms