RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
TRIM39-202ENST00000376659 POLRMTO00411 1230 aaKnown RBP10.9□□□□□ -0.66
TRIM39-202ENST00000376659 MFAP3LO75121 409 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 FAM182BQ5T319 152 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 OLFM4Q6UX06 510 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 WDR66Q8TBY9 1149 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 C8orf37Q96NL8 207 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 JAG2Q9Y219 1238 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIM39-202ENST00000376659 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
TRIM39-202ENST00000376659 SMARCA1P28370 1054 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 TPM4P67936 248 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 TFAP4Q01664 338 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 ELF2Q15723 593 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 DISC1Q9NRI5 854 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 TOMM22Q9NS69 142 aa10.9□□□□□ -0.66
TRIM39-202ENST00000376659 SLU7O95391 586 aaKnown RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 CLK2P49760 499 aaKnown RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 ERVK-24P63145 666 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 KCNB1Q14721 858 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 ZNF658Q5TYW1 1059 aaPredicted RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 ADSSL1Q8N142 457 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 PDILTQ8N807 584 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 CGNQ9P2M7 1197 aaKnown RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 FHOD1Q9Y613 1164 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 NKRFO15226 690 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 ADKP55263 362 aaKnown RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 CFAP100Q494V2 611 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 SPTY2D1Q68D10 685 aaPredicted RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 FEZ1Q99689 392 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 CCSER1Q9C0I3 900 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 CD209Q9NNX6 404 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 MCM9Q9NXL9 1143 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 SERPINC1P01008 464 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 TOP1P11387 765 aaKnown RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 ARHGAP25P42331 645 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 EHHADHQ08426 723 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 RBL2Q08999 1139 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 KRT31Q15323 416 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 NEDD1Q8NHV4 660 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 RASGRP4Q8TDF6 673 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 BAG1Q99933 345 aaPredicted RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 RIOX1Q9H6W3 641 aa10.89□□□□□ -0.67
TRIM39-202ENST00000376659 REXO2Q9Y3B8 237 aaKnown RBP10.89□□□□□ -0.67
TRIM39-202ENST00000376659 SOWAHDA6NJG2 315 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 ZPR1O75312 459 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 DMTNQ08495 405 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 IGSF22Q8N9C0 903 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 MTMR9Q96QG7 549 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 RHOBTB3O94955 611 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 ABL1P00519 1130 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 XBP1P17861 261 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 SEMA3FQ13275 785 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 HSP90AA4PQ58FG1 418 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 GALNT17Q6IS24 598 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 ZNF397Q8NF99 534 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 MTMR8Q96EF0 704 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 DUSP9Q99956 384 aaKnown RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 PRDM10Q9NQV6 1147 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 ESYT2A0FGR8 921 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 UTP14CQ5TAP6 766 aaKnown RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 TTI2Q6NXR4 508 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 FAM196AQ6ZSG2 479 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 GIMAP8Q8ND71 665 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 CTNND2Q9UQB3 1225 aa10.88□□□□□ -0.67
TRIM39-202ENST00000376659 BRCA1P38398 1863 aaKnown RBP10.88□□□□□ -0.67
TRIM39-202ENST00000376659 PPP1R11O60927 126 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-202ENST00000376659 RPN1P04843 607 aaKnown RBP10.87□□□□□ -0.67
TRIM39-202ENST00000376659 PRCPP42785 496 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 AFMP43652 599 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 CDK8P49336 464 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 TCP11X2Q5H9J9 407 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 PROM2Q8N271 834 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 CERS5Q8N5B7 392 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 TBC1D16Q8TBP0 767 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 USP21Q9UK80 565 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 LOXHD1Q8IVV2 1947 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 BTDP43251 543 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 TGFBRAP1Q8WUH2 860 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 OGFRQ9NZT2 677 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 GDAQ9Y2T3 454 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 MYO3BQ8WXR4 1341 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 LAD1O00515 517 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 CALML3P27482 149 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 MCM7P33993 719 aa10.87□□□□□ -0.67
TRIM39-202ENST00000376659 COL2A1P02458 1487 aaPredicted RBP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 COL4A5P29400 1685 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms