RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 IL17AQ16552 155 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 TADA2BQ86TJ2 420 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 LCORLQ8N3X6 602 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 KLK7P49862 253 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 JAKMIP2Q96AA8 810 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 BAZ2BQ9UIF8 2168 aaKnown RBP12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 SCP2P22307 547 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 IRAK1P51617 712 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 PPARAQ07869 468 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 PAK1Q13153 545 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 PTGDRQ13258 359 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 FKBP15Q5T1M5 1219 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 CCNI2Q6ZMN8 369 aaPredicted RBP12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 CEP120Q8N960 986 aa12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
TM9SF2-201ENST00000376387 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.35
TM9SF2-201ENST00000376387 PRCPP42785 496 aa12.9□□□□□ -0.35
TM9SF2-201ENST00000376387 ALX1Q15699 326 aa12.9□□□□□ -0.35
TM9SF2-201ENST00000376387 MIGA1Q8NAN2 632 aa12.9□□□□□ -0.35
TM9SF2-201ENST00000376387 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.35
TM9SF2-201ENST00000376387 NID2Q14112 1375 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 TDO2P48775 406 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 PAPD7Q5XG87 772 aaKnown RBP12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 PDXDC2PQ6P474 469 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 SMCR8Q8TEV9 937 aaPredicted RBP12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 POLD4Q9HCU8 107 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 AGPAT5Q9NUQ2 364 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 SHOX2O60902 331 aaPredicted RBP12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 TUBBP07437 444 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 BIRC2Q13490 618 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 HLFQ16534 295 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 FBXW10Q5XX13 1052 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 PHF20Q9BVI0 1012 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 KRT23Q9C075 422 aa12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
TM9SF2-201ENST00000376387 CPP00450 1065 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 KRT2P35908 639 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 CAGE1Q8TC20 777 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 SMARCAL1Q9NZC9 954 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 DCCP43146 1447 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 PDE8BO95263 885 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 NPY5RQ15761 445 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 A0A087WUV0 522 aaPredicted RBP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 RASGRF1Q13972 1273 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 FAM76AQ8TAV0 307 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 FAM169AQ9Y6X4 670 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 COL18A1P39060 1754 aa12.88□□□□□ -0.35
TM9SF2-201ENST00000376387 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 RASSF10A6NK89 507 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 SLC7A5Q01650 507 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 KIAA1328Q86T90 577 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 YY1AP1Q9H869 796 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 ERICH2A1L162 156 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 FUT2Q10981 343 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 SND1Q7KZF4 910 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■■■■■ 30.1
TM9SF2-201ENST00000376387 ZNF512BQ96KM6 892 aaPredicted RBP12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 TNKSO95271 1327 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 SDR42E1Q8WUS8 393 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 LRRC1Q9BTT6 524 aa12.87□□□□□ -0.35
TM9SF2-201ENST00000376387 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms