RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
CHRDL2-202ENST00000376324 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
CHRDL2-202ENST00000376324 RPAP3Q9H6T3 665 aaPredicted RBP17.1■□□□□ 0.33
CHRDL2-202ENST00000376324 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
CHRDL2-202ENST00000376324 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
CHRDL2-202ENST00000376324 FBXO28Q9NVF7 368 aa17.1■□□□□ 0.33
CHRDL2-202ENST00000376324 SMARCA1P28370 1054 aa17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 STAT2P52630 851 aa17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 NUCB2P80303 420 aa17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 PPIL2Q13356 520 aa17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 GADL1Q6ZQY3 521 aa17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 ZNF784Q8NCA9 323 aaPredicted RBP17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
CHRDL2-202ENST00000376324 PTPRFP10586 1907 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 SCG2P13521 617 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 GJA5P36382 358 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 HUNKP57058 714 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 TRIM29Q14134 588 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 MTMR6Q9Y217 621 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 ZDHHC9Q9Y397 364 aa17.08■□□□□ 0.32
CHRDL2-202ENST00000376324 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 TOMM70O94826 608 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 CHURC1Q8WUH1 139 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 KCNJ14Q9UNX9 436 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 FLOT1O75955 427 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 BRD1O95696 1058 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 CDC37Q16543 378 aaPredicted RBP17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 KRT40Q6A162 431 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 BTNL9Q6UXG8 535 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 FAM160B2Q86V87 743 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 WNK4Q96J92 1243 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
CHRDL2-202ENST00000376324 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
CHRDL2-202ENST00000376324 CXCL11O14625 94 aa17.06■□□□□ 0.32
CHRDL2-202ENST00000376324 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
CHRDL2-202ENST00000376324 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
CHRDL2-202ENST00000376324 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
CHRDL2-202ENST00000376324 KCNH4Q9UQ05 1017 aa17.06■□□□□ 0.32
CHRDL2-202ENST00000376324 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 XBP1P17861 261 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 QRICH1Q2TAL8 776 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 FBXO18Q8NFZ0 1043 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 COA7Q96BR5 231 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
CHRDL2-202ENST00000376324 ZBTB5O15062 677 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 STXBP3O00186 592 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 PLA2G6O60733 806 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 NAPAP54920 295 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 NLRP5P59047 1200 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 SNAPC2Q13487 334 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 F13A1P00488 732 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 USH1GQ495M9 461 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 SPRYD7Q5W111 196 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 BARHL2Q9NY43 387 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
CHRDL2-202ENST00000376324 LOC285556D6RIA3 1793 aa17.02■□□□□ 0.32
CHRDL2-202ENST00000376324 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
CHRDL2-202ENST00000376324 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.32
CHRDL2-202ENST00000376324 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
CHRDL2-202ENST00000376324 ATG4CQ96DT6 458 aa17.02■□□□□ 0.32
CHRDL2-202ENST00000376324 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
CHRDL2-202ENST00000376324 TMEM88BA6NKF7 163 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms