RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ABT1Q9ULW3 272 aaKnown RBP26.55■■□□□ 1.84
HLA-C-202ENST00000376237 FDPSP14324 419 aaKnown RBP26.55■■□□□ 1.84
HLA-C-202ENST00000376237 PDCP20941 246 aa26.55■■□□□ 1.84
HLA-C-202ENST00000376237 SLC16A2P36021 539 aa26.55■■□□□ 1.84
HLA-C-202ENST00000376237 DGKZQ13574 1117 aa26.55■■□□□ 1.84
HLA-C-202ENST00000376237 SYDE2Q5VT97 1194 aa26.55■■□□□ 1.84
HLA-C-202ENST00000376237 PRPF38AQ8NAV1 312 aaKnown RBP26.55■■□□□ 1.84
HLA-C-202ENST00000376237 TANGO6Q9C0B7 1094 aa26.55■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L15C9J2P7 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L13C9JLJ4 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L11C9JVI0 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L18D6R9N7 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L22D6RA61 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L17D6RBQ6 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L19D6RCP7 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L20D6RJB6 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 CETPP11597 493 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 USP17L24Q0WX57 530 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 SLC35G1Q2M3R5 365 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 GADL1Q6ZQY3 521 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 CCDC102AQ96A19 550 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 JMJD4Q9H9V9 463 aa26.54■■□□□ 1.84
HLA-C-202ENST00000376237 SEC63Q9UGP8 760 aaKnown RBP26.54■■□□□ 1.84
HLA-C-202ENST00000376237 RASAL3Q86YV0 1011 aa26.53■■□□□ 1.84
HLA-C-202ENST00000376237 MTMR8Q96EF0 704 aa26.53■■□□□ 1.84
HLA-C-202ENST00000376237 SLF1Q9BQI6 1058 aa26.53■■□□□ 1.84
HLA-C-202ENST00000376237 CPVLQ9H3G5 476 aa26.53■■□□□ 1.84
HLA-C-202ENST00000376237 VAT1LQ9HCJ6 419 aa26.53■■□□□ 1.84
HLA-C-202ENST00000376237 PPFIA3O75145 1194 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 FDX1P10109 184 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 HOXA7P31268 230 aaPredicted RBP26.52■■□□□ 1.84
HLA-C-202ENST00000376237 APLP1P51693 650 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 PABPC4Q13310 644 aaKnown RBP eCLIP26.52■■□□□ 1.84
HLA-C-202ENST00000376237 CATSPERGQ6ZRH7 1159 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 MS4A4AQ96JQ5 239 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 PRR12Q9ULL5 1215 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 AGTPBP1Q9UPW5 1226 aa26.52■■□□□ 1.84
HLA-C-202ENST00000376237 FLOT1O75955 427 aa26.51■■□□□ 1.83
HLA-C-202ENST00000376237 COG2Q14746 738 aa26.51■■□□□ 1.83
HLA-C-202ENST00000376237 PFKFB3Q16875 520 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-202ENST00000376237 RGS22Q8NE09 1264 aa26.51■■□□□ 1.83
HLA-C-202ENST00000376237 CREBZFQ9NS37 354 aa26.51■■□□□ 1.83
HLA-C-202ENST00000376237 MYPNQ86TC9 1320 aa26.51■■□□□ 1.83
HLA-C-202ENST00000376237 PNMA6FA0A0J9YX94 578 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 DTNBO60941 627 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 PKN1Q16512 942 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 LARP1BQ659C4 914 aaKnown RBP26.5■■□□□ 1.83
HLA-C-202ENST00000376237 KIFC2Q96AC6 838 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 PIGSQ96S52 555 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 ALG1Q9BT22 464 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 HOXC10Q9NYD6 342 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 PPP1R9AQ9ULJ8 1098 aa26.5■■□□□ 1.83
HLA-C-202ENST00000376237 hCG_1984214I3L0E3 225 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 ZBTB5O15062 677 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 SLC10A3P09131 477 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 SCG2P13521 617 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 XBP1P17861 261 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 MOGSQ13724 837 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 HOMER1Q86YM7 354 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 ZNF713Q8N859 430 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-202ENST00000376237 FBXO28Q9NVF7 368 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 TRAF1Q13077 416 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 TREML2Q5T2D2 321 aa26.49■■□□□ 1.83
HLA-C-202ENST00000376237 FAM177A1Q8N128 213 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-202ENST00000376237 PTPRFP10586 1907 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 CCL15-CCL14A0A0B4J2E2 113 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 hCG_1642624A0A1W2PR95 340 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 MANSC4A6NHS7 340 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-202ENST00000376237 DDIT3P35638 169 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 CCL15Q16663 113 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 PIBF1Q8WXW3 757 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 RANBP17Q9H2T7 1088 aaKnown RBP26.48■■□□□ 1.83
HLA-C-202ENST00000376237 CIZ1Q9ULV3 898 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-202ENST00000376237 SLC45A1Q9Y2W3 748 aa26.48■■□□□ 1.83
HLA-C-202ENST00000376237 LOC285556D6RIA3 1793 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 TESPA1A2RU30 521 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-202ENST00000376237 DSG3P32926 999 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 INHBEP58166 350 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 MKRN3Q13064 507 aaKnown RBP26.47■■□□□ 1.83
HLA-C-202ENST00000376237 CDC37Q16543 378 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-202ENST00000376237 GPAT2Q6NUI2 795 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 C8orf76Q96K31 380 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 SH3GLB2Q9NR46 395 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 PNMA2Q9UL42 364 aa26.47■■□□□ 1.83
HLA-C-202ENST00000376237 SYT1P21579 422 aa26.46■■□□□ 1.83
HLA-C-202ENST00000376237 OSBPP22059 807 aa26.46■■□□□ 1.83
HLA-C-202ENST00000376237 TRIM29Q14134 588 aa26.46■■□□□ 1.83
HLA-C-202ENST00000376237 RASSF10A6NK89 507 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 IRX3P78415 501 aaPredicted RBP26.45■■□□□ 1.83
HLA-C-202ENST00000376237 QRICH1Q2TAL8 776 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 ANKRD23Q86SG2 305 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 BRI3BPQ8WY22 251 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 BARHL2Q9NY43 387 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 PNMA3Q9UL41 463 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 ADAMTS5Q9UNA0 930 aa26.45■■□□□ 1.83
HLA-C-202ENST00000376237 FAM155AB1AL88 458 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-202ENST00000376237 ZBED4O75132 1171 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 FBXO18Q8NFZ0 1043 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 CCDC12Q8WUD4 166 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-202ENST00000376237 AMNQ9BXJ7 453 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms