RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 PTPREP23469 700 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 TBC1D8BQ0IIM8 1120 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 SPECC1LQ69YQ0 1117 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 TTBK2Q6IQ55 1244 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
ZNF550-203ENST00000376230 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 MEIS1O00470 390 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 GSTO1P78417 241 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 RESP18Q5W5W9 173 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 KANK3Q6NY19 840 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 CPXCR1Q8N123 301 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
ZNF550-203ENST00000376230 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
ZNF550-203ENST00000376230 POTEMA6NI47 508 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 AKR1B10O60218 316 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 TMEM51Q9NW97 253 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 PSMA7O14818 248 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CALML3P27482 149 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CDK8P49336 464 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CHMP4BP1P59074 171 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 PAK1Q13153 545 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CABP7Q86V35 215 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 MLKLQ8NB16 471 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 RDH13Q8NBN7 331 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 BCS1LQ9Y276 419 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 SAMM50Q9Y512 469 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 MED1Q15648 1581 aaPredicted RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 SLC1A4P43007 532 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 CCDC174Q6PII3 467 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 FOXP1Q9H334 677 aaPredicted RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 RSPH14Q9UHP6 348 aa11.3□□□□□ -0.6
ZNF550-203ENST00000376230 FBXO2Q9UK22 296 aaPredicted RBP11.3□□□□□ -0.6
ZNF550-203ENST00000376230 B4DLN1 442 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 PPP6R2O75170 966 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 CCDC175P0C221 793 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP8P40818 1118 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 USP17L6PQ6QN14 398 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 MIGA2Q7L4E1 593 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 SUGCTQ9HAC7 445 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 A0A087X0B3 334 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 TRIM66O15016 1216 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 RAD17O75943 681 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 MMP10P09238 476 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 PTPAQ15257 358 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 TMEM266Q2M3C6 531 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 DNAJC21Q5F1R6 531 aaKnown RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 SH2D3AQ9BRG2 576 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 RIOK1Q9BRS2 568 aaKnown RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 OSBPL5Q9H0X9 879 aaPredicted RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 PDE11AQ9HCR9 933 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 TRAF5O00463 557 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 CFBP00751 764 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 REXO1Q8N1G1 1221 aaKnown RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 CCDC148Q8NFR7 591 aa11.29□□□□□ -0.6
ZNF550-203ENST00000376230 SRPRBQ9Y5M8 271 aaKnown RBP11.29□□□□□ -0.6
ZNF550-203ENST00000376230 CHRNA5P30532 468 aa11.28□□□□□ -0.6
ZNF550-203ENST00000376230 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
ZNF550-203ENST00000376230 MORC3Q14149 939 aa11.28□□□□□ -0.6
ZNF550-203ENST00000376230 LLGL1Q15334 1064 aa11.28□□□□□ -0.6
ZNF550-203ENST00000376230 NOC4LQ9BVI4 516 aaKnown RBP11.28□□□□□ -0.6
ZNF550-203ENST00000376230 JCADQ9P266 1359 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms