RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TNNI3KQ59H18 835 aa10.2□□□□□ -0.78
UBR4-201ENST00000375218 HHATQ5VTY9 493 aa10.2□□□□□ -0.78
UBR4-201ENST00000375218 TRMT2BQ96GJ1 504 aaKnown RBP10.2□□□□□ -0.78
UBR4-201ENST00000375218 PAPOLBQ9NRJ5 636 aaKnown RBP10.2□□□□□ -0.78
UBR4-201ENST00000375218 IGSF1Q8N6C5 1336 aa10.2□□□□□ -0.78
UBR4-201ENST00000375218 SART1O43290 800 aaKnown RBP10.19□□□□□ -0.78
UBR4-201ENST00000375218 RAC2P15153 192 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 EPHB1P54762 984 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 CCDC80Q76M96 950 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 CARNMT1Q8N4J0 409 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 TMCO5AQ8N6Q1 288 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 IPO9Q96P70 1041 aaKnown RBP10.19□□□□□ -0.78
UBR4-201ENST00000375218 H0YC42 278 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 PPP1R12BO60237 982 aaPredicted RBP10.19□□□□□ -0.78
UBR4-201ENST00000375218 HOXA10P31260 410 aaPredicted RBP10.19□□□□□ -0.78
UBR4-201ENST00000375218 PDE6CP51160 858 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 NUBP1P53384 320 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 SKOR1P84550 965 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 MLC1Q15049 377 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 APPBP2Q92624 585 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 DEPDC7Q96QD5 511 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 DEF6Q9H4E7 631 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 ALG2Q9H553 416 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 HMX1Q9NP08 348 aaPredicted RBP10.19□□□□□ -0.78
UBR4-201ENST00000375218 SPATA7Q9P0W8 599 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 F8VZ95 297 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 HMOX1P09601 288 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 GUCY2CP25092 1073 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 TMEM259Q4ZIN3 620 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 POGKQ9P215 609 aa10.19□□□□□ -0.78
UBR4-201ENST00000375218 FDX1P10109 184 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 PLIN5Q00G26 463 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 TRAF1Q13077 416 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 DCTN4Q9UJW0 460 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 LEMD3Q9Y2U8 911 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 ZNF24P17028 368 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 NLRP12P59046 1061 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 LAMC2Q13753 1193 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 ACAP1Q15027 740 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 DBN1Q16643 649 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 PACS1Q6VY07 963 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 MTRF1O75570 445 aaKnown RBP10.18□□□□□ -0.78
UBR4-201ENST00000375218 FOXK1P85037 733 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 DNAJC7Q99615 494 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 KIAA1468Q9P260 1216 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 TMX2Q9Y320 296 aa10.18□□□□□ -0.78
UBR4-201ENST00000375218 BIN1O00499 593 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 SLC5A1P13866 664 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 METTL24Q5JXM2 366 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 XRRA1Q6P2D8 792 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 NLRP14Q86W24 1093 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 ZSWIM6Q9HCJ5 1215 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 RRN3Q9NYV6 651 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 RSPH14Q9UHP6 348 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 PA2G4Q9UQ80 394 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 LRRFIP2Q9Y608 721 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 SMC2O95347 1197 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 SLC3A2P08195 630 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 CENPAP49450 140 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 MXI1P50539 228 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 ROR1Q01973 937 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 AIMP1Q12904 312 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 SMAD4Q13485 552 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 LRRC43Q8N309 656 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 EYA1Q99502 592 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 KDM6AO15550 1401 aaPredicted RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 AKR1B15C9JRZ8 316 aaPredicted RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 PYGLP06737 847 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 TRIM21P19474 475 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 CCNCP24863 283 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 RBM6P78332 1123 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 TMEM151BQ8IW70 566 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 C1orf74Q96LT6 269 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 HPS4Q9NQG7 708 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 DCCP43146 1447 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 SSBP05455 408 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBR4-201ENST00000375218 POU3F3P20264 500 aaPredicted RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 RARSP54136 660 aaKnown RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
UBR4-201ENST00000375218 ALPK1Q96QP1 1244 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 LRRCC1Q9C099 1032 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 CCDC68Q9H2F9 335 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 DISC1Q9NRI5 854 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 SEPT10Q9P0V9 454 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
UBR4-201ENST00000375218 F5H423 210 aaPredicted RBP10.16□□□□□ -0.78
UBR4-201ENST00000375218 VIMP08670 466 aaKnown RBP10.16□□□□□ -0.78
UBR4-201ENST00000375218 NAT8LQ8N9F0 302 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 RSAD2Q8WXG1 361 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 MRC1P22897 1456 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 CEMIPQ8WUJ3 1361 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 CACNA1FO60840 1977 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 E2F6O75461 281 aa10.16□□□□□ -0.78
UBR4-201ENST00000375218 LDHBP07195 334 aaKnown RBP10.16□□□□□ -0.78
UBR4-201ENST00000375218 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms