RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CETN3O15182 167 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 BBOX1O75936 387 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 ARID4AP29374 1257 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 FGAP02671 866 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 KLHL7Q8IXQ5 586 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 PCP11498 1178 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 MAP2K2P36507 400 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 ME3Q16798 604 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 PHLDB2Q86SQ0 1253 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 ZNF500O60304 480 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 STX10O60499 249 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 ASIC3Q9UHC3 531 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 NCBP1Q09161 790 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 POSTNQ15063 836 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 DLGAP5Q15398 846 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
NPLOC4-202ENST00000374747 LIN9Q5TKA1 542 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 PIK3AP1Q6ZUJ8 805 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 SYCE1Q8N0S2 351 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 SLF1Q9BQI6 1058 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 RIMS1Q86UR5 1692 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 TTLL11Q8NHH1 800 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 SASH1O94885 1247 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 GAS8O95995 478 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 BIRC3Q13489 604 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 KRT40Q6A162 431 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 PPP1R21Q6ZMI0 780 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 MYL10Q9BUA6 226 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 HGSO14964 777 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 WHAMMP3Q1A5X7 153 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 TTC38Q5R3I4 469 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 SUSD4Q5VX71 490 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 HAUS3Q68CZ6 603 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 BAIAP2L1Q9UHR4 511 aa13.58□□□□□ -0.24
NPLOC4-202ENST00000374747 RPS6KA1Q15418 735 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 PFKFB2O60825 505 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 ZNF654Q8IZM8 581 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 RNF10Q8N5U6 811 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 NUF2Q9BZD4 464 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 BRD1O95696 1058 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 PICK1Q9NRD5 415 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 FLOT1O75955 427 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 GEN1Q17RS7 908 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 CCT6BQ92526 530 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 CTTNBP2NLQ9P2B4 639 aa13.57□□□□□ -0.24
NPLOC4-202ENST00000374747 JAK2O60674 1132 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 SLC1A4P43007 532 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 KCNQ4P56696 695 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 CCDC84Q86UT8 332 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 PHKBQ93100 1093 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 PSMB7Q99436 277 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 SAR1BQ9Y6B6 198 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 ADCY9O60503 1353 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 AFF2P51816 1311 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 JCADQ9P266 1359 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 RASSF2P50749 326 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 ITIH3Q06033 890 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 MED23Q9ULK4 1368 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 I3L4J1 428 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 KLHL30Q0D2K2 578 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 HLFQ16534 295 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 DENND2CQ68D51 928 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 SDR42E1Q8WUS8 393 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 KIFC2Q96AC6 838 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 KIF20BQ96Q89 1820 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 RNF40O75150 1001 aa13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-202ENST00000374747 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms