RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 ERO1BQ86YB8 467 aa20.37■□□□□ 0.85
PFDN6-201ENST00000374606 GMCL1P1Q8NEA9 526 aa20.37■□□□□ 0.85
PFDN6-201ENST00000374606 ACER1Q8TDN7 264 aa20.37■□□□□ 0.85
PFDN6-201ENST00000374606 GOPCQ9HD26 462 aa20.37■□□□□ 0.85
PFDN6-201ENST00000374606 TMX2Q9Y320 296 aa20.37■□□□□ 0.85
PFDN6-201ENST00000374606 A0A1W2PRG0 241 aa20.36■□□□□ 0.85
PFDN6-201ENST00000374606 RAD21O60216 631 aa20.36■□□□□ 0.85
PFDN6-201ENST00000374606 CDKL5O76039 1030 aa20.36■□□□□ 0.85
PFDN6-201ENST00000374606 PDHBP11177 359 aa20.36■□□□□ 0.85
PFDN6-201ENST00000374606 CDC27P30260 824 aa20.36■□□□□ 0.85
PFDN6-201ENST00000374606 SNAPC2Q13487 334 aa20.36■□□□□ 0.85
PFDN6-201ENST00000374606 LLPHQ9BRT6 129 aaKnown RBP20.36■□□□□ 0.85
PFDN6-201ENST00000374606 BTBD19C9JJ37 291 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 PARP1P09874 1014 aaKnown RBP20.35■□□□□ 0.85
PFDN6-201ENST00000374606 ASPRV1Q53RT3 343 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 SLFN13Q68D06 897 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 CHRDL2Q6WN34 429 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 RASGRP2Q7LDG7 609 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 WDR18Q9BV38 432 aa20.35■□□□□ 0.85
PFDN6-201ENST00000374606 F5H6K3 240 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 SNHG28P0DPA3 235 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 ADD1P35611 737 aaKnown RBP20.34■□□□□ 0.85
PFDN6-201ENST00000374606 GNAQP50148 359 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 KLRC3Q07444 240 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 PPIL2Q13356 520 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 ZYXQ15942 572 aaKnown RBP20.34■□□□□ 0.85
PFDN6-201ENST00000374606 CCDC96Q2M329 555 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 TMTC3Q6ZXV5 915 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 NSUN7Q8NE18 718 aaKnown RBP20.34■□□□□ 0.85
PFDN6-201ENST00000374606 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 FAM217BQ9NTX9 383 aaPredicted RBP20.34■□□□□ 0.85
PFDN6-201ENST00000374606 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
PFDN6-201ENST00000374606 SMC3Q9UQE7 1217 aa20.34■□□□□ 0.85
PFDN6-201ENST00000374606 PTPDC1A2A3K4 754 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 IRF6O14896 467 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 NDUFB10O96000 172 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 ZNF280CQ8ND82 737 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 SHISA4Q96DD7 197 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 KIAA1683Q9H0B3 1180 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 MAD2L2Q9UI95 211 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 ZHX2Q9Y6X8 837 aa20.33■□□□□ 0.85
PFDN6-201ENST00000374606 FRMPD2Q68DX3 1309 aaPredicted RBP20.32■□□□□ 0.84
PFDN6-201ENST00000374606 PALM3A6NDB9 673 aaPredicted RBP20.32■□□□□ 0.84
PFDN6-201ENST00000374606 TRIM75PA6NK02 468 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 USP17L10C9JJH3 530 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 JAK2O60674 1132 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 PLEKHA8P1O95397 391 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 CTDNEP1O95476 244 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 SLC1A4P43007 532 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 HMGN5P82970 282 aaKnown RBP20.32■□□□□ 0.84
PFDN6-201ENST00000374606 ZNF543Q08ER8 600 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 SPP2Q13103 211 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 MTMR2Q13614 643 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 GPATCH4Q5T3I0 446 aaKnown RBP20.32■□□□□ 0.84
PFDN6-201ENST00000374606 DPF3Q92784 378 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 GMCL1Q96IK5 515 aa20.32■□□□□ 0.84
PFDN6-201ENST00000374606 GOLGA8HP0CJ92 632 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 IFNAR1P17181 557 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 HOXD10P28358 340 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 USP14P54578 494 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 MTFR1Q15390 333 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 NTRK3Q16288 839 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 STAG2Q8N3U4 1231 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 SMARCC2Q8TAQ2 1214 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 LPAR1Q92633 364 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 LZTS2Q9BRK4 669 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 SRRDQ9UH36 339 aa20.31■□□□□ 0.84
PFDN6-201ENST00000374606 STK36Q9NRP7 1315 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 PTPRFP10586 1907 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 KLRF2D3W0D1 207 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 ECM2O94769 699 aaPredicted RBP20.3■□□□□ 0.84
PFDN6-201ENST00000374606 BMP3P12645 472 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 GJB2P29033 226 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 PPATQ06203 517 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 C17orf99Q6UX52 265 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 SPICE1Q8N0Z3 855 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 CMTR1Q8N1G2 835 aaKnown RBP20.3■□□□□ 0.84
PFDN6-201ENST00000374606 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 CWC22Q9HCG8 908 aaKnown RBP20.3■□□□□ 0.84
PFDN6-201ENST00000374606 GPCPD1Q9NPB8 672 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
PFDN6-201ENST00000374606 AFG3L2Q9Y4W6 797 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 SZT2Q5T011 3432 aa20.3■□□□□ 0.84
PFDN6-201ENST00000374606 CNTNAP5Q8WYK1 1306 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 MYH6P13533 1939 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 DTNBO60941 627 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 PPFIA3O75145 1194 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 GRK4P32298 578 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 PSMC4P43686 418 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 BACE1P56817 501 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
PFDN6-201ENST00000374606 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 SRBD1Q8N5C6 995 aaKnown RBP20.29■□□□□ 0.84
PFDN6-201ENST00000374606 FAM184AQ8NB25 1140 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 RAET1EQ8TD07 263 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 PHKBQ93100 1093 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms