RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 AKAP17AQ02040 695 aaKnown RBP16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 SNAPC2Q13487 334 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 SPRYD7Q5W111 196 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 FAM160B2Q86V87 743 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 FAM184AQ8NB25 1140 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 CHURC1Q8WUH1 139 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 MTMR8Q96EF0 704 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 JMJD4Q9H9V9 463 aa16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
SMPDL3B-201ENST00000373888 MOGSQ13724 837 aa16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 PKN1Q16512 942 aa16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 RGMBQ6NW40 437 aa16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 FASTKD5Q7L8L6 764 aaKnown RBP16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 WASF1Q92558 559 aa16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 HHIPL1Q96JK4 782 aa16.94■□□□□ 0.3
SMPDL3B-201ENST00000373888 PDCP20941 246 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 GTF2A2P52657 109 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 IKQ13123 557 aaPredicted RBP16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 PFKFB3Q16875 520 aaPredicted RBP16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 SLF1Q9BQI6 1058 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 PRR12Q9ULL5 1215 aa16.93■□□□□ 0.3
SMPDL3B-201ENST00000373888 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L15C9J2P7 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L13C9JLJ4 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L11C9JVI0 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L18D6R9N7 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L22D6RA61 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L17D6RBQ6 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L19D6RCP7 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L20D6RJB6 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 SCG2P13521 617 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 ZNF157P51786 506 aaPredicted RBP16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 NUCB2P80303 420 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 USP17L24Q0WX57 530 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 TREML2Q5T2D2 321 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 GADL1Q6ZQY3 521 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 PRPF38AQ8NAV1 312 aaKnown RBP16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 PIGSQ96S52 555 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 ALG1Q9BT22 464 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 VAT1LQ9HCJ6 419 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 SEC63Q9UGP8 760 aaKnown RBP16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 ABT1Q9ULW3 272 aaKnown RBP16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 AGTPBP1Q9UPW5 1226 aa16.92■□□□□ 0.3
SMPDL3B-201ENST00000373888 ZBTB5O15062 677 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 FLOT1O75955 427 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 CETPP11597 493 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 PTMSP20962 102 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 MYPNQ86TC9 1320 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 MYH6P13533 1939 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 PNMA6FA0A0J9YX94 578 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 SLC10A3P09131 477 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 SYT1P21579 422 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 APLP1P51693 650 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 CDC37Q16543 378 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 KIFC2Q96AC6 838 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 AIFM3Q96NN9 605 aa16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
SMPDL3B-201ENST00000373888 BAZ2BQ9UIF8 2168 aaKnown RBP16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 FDX1P10109 184 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 COG2Q14746 738 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 QRICH1Q2TAL8 776 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 GPAT2Q6NUI2 795 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 FAM177A1Q8N128 213 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 C8orf76Q96K31 380 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 GBP4Q96PP9 640 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 RLFQ13129 1914 aa16.9■□□□□ 0.3
SMPDL3B-201ENST00000373888 CCL15-CCL14A0A0B4J2E2 113 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 STX6O43752 255 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 DSG3P32926 999 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 PABPC4Q13310 644 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 CCL15Q16663 113 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 WWC2Q6AWC2 1192 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 FBXO18Q8NFZ0 1043 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 BRI3BPQ8WY22 251 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 ADAMTS5Q9UNA0 930 aa16.89■□□□□ 0.29
SMPDL3B-201ENST00000373888 SLC45A1Q9Y2W3 748 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms