RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 OPA1O60313 960 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ZNF189O75820 626 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ADORA1P30542 326 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ZAP70P43403 619 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 POSTNQ15063 836 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 DZIP1Q86YF9 867 aaKnown RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 PIGBQ92521 554 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 LPIN2Q92539 896 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 MTRQ99707 1265 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SDF4Q9BRK5 362 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 MAP3K20Q9NYL2 800 aaKnown RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SWAP70Q9UH65 585 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 NEDD4P46934 1319 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 A0A1B0GUL6 1792 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 IKBKBO14920 756 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 MCAMP43121 646 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 KIAA0753Q2KHM9 967 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SEPT14Q6ZU15 432 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ZNF34Q8IZ26 560 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 KCNN1Q92952 543 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SMARCE1Q969G3 411 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SAAL1Q96ER3 474 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 CDCA7Q9BWT1 371 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 PUS7LQ9H0K6 701 aaKnown RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 CNNM2Q9H8M5 875 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 KLF18A0A0U1RQI7 1052 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 BOLA2-SMG1P6H3BVE0 249 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SPTLC2O15270 562 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ATP6V1G1O75348 118 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 MSL3P1P0C860 447 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 GNAT2P19087 354 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ITGA6P23229 1130 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 KIF23Q02241 960 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 USP4Q13107 963 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 SLC39A14Q15043 492 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 PUM3Q15397 648 aaKnown RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 ELF2Q15723 593 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 CCDC92Q53HC0 331 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-201ENST00000373386 METTL24Q5JXM2 366 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 L2HGDHQ9H9P8 463 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 IGSF5Q9NSI5 407 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 HOXC10Q9NYD6 342 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 RGL1Q9NZL6 768 aa9.2□□□□□ -0.94
GARNL3-201ENST00000373386 PNPLA7Q6ZV29 1317 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 DOT1LQ8TEK3 1739 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 DLEC1Q9Y238 1755 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 CCDC194A0A1B0GVG4 234 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 GOLGA8BA8MQT2 603 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 HOXD10P28358 340 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 MAGEA10P43363 369 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-201ENST00000373386 ADCY1Q08828 1119 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 WASHC4Q2M389 1173 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 FBXO38Q6PIJ6 1188 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-201ENST00000373386 WASF1Q92558 559 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 CCDC114Q96M63 670 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 MYO6Q9UM54 1294 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 HPSEQ9Y251 543 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 NRAPQ86VF7 1730 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 SFPQP23246 707 aaKnown RBP eCLIP9.19□□□□□ -0.94
GARNL3-201ENST00000373386 SCARF1Q14162 830 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 PPP2R5BQ15173 497 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 STK38Q15208 465 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 ANO1Q5XXA6 986 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 LDHAL6AQ6ZMR3 332 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 DNAJC10Q8IXB1 793 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 JPH2Q9BR39 696 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-201ENST00000373386 NCOA5Q9HCD5 579 aaKnown RBP9.19□□□□□ -0.94
GARNL3-201ENST00000373386 GINM1Q9NU53 330 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 ORC3Q9UBD5 711 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-201ENST00000373386 GABBR1Q9UBS5 961 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 TUBE1Q9UJT0 475 aa9.19□□□□□ -0.94
GARNL3-201ENST00000373386 PARNO95453 639 aaKnown RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 HNRNPH1P31943 449 aaKnown RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 EVA1CP58658 441 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 NLRP12P59046 1061 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 PACS1Q6VY07 963 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 PPP1R13BQ96KQ4 1090 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 IRS4O14654 1257 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 CPLX1O14810 134 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 GPTP24298 496 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 NT5C2P49902 561 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 E4F1Q66K89 784 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 OLFML1Q6UWY5 402 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 TMC6Q7Z403 805 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 FAM89AQ96GI7 184 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 SLC39A3Q9BRY0 314 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 INO80BQ9C086 356 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 ODF2LQ9ULJ1 636 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 MYO5AQ9Y4I1 1855 aaKnown RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 BCL9LQ86UU0 1499 aa9.18□□□□□ -0.94
GARNL3-201ENST00000373386 COL5A3P25940 1745 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-201ENST00000373386 A0A0G2JLW4 131 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms