RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 SYNGAP1Q96PV0 1343 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 ZNFX1Q9P2E3 1918 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 DNAJC25-GNG10A0A024R161 153 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 TMEM265A0A087WTH1 108 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 MOXD2PA6NHM9 499 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 NDUFB10O96000 172 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 RAG1P15918 1043 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 ACLYP53396 1101 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 EPHB4P54760 987 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 FAAP100Q0VG06 881 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 SNRNP48Q6IEG0 339 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 CCSAPQ6IQ19 270 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 ZNF467Q7Z7K2 595 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 NUP133Q8WUM0 1156 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 MKL1Q969V6 931 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 NUP88Q99567 741 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 ECHDC1Q9NTX5 307 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 RIPK3Q9Y572 518 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 LTBP2Q14767 1821 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 VCANP13611 3396 aa15.66■□□□□ 0.1
TRAPPC3-201ENST00000373159 BAZ2AQ9UIF9 1905 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 IGKV6D-41A0A0C4DH26 115 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 DCDC2CA8MYV0 355 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 SMARCA5O60264 1052 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 PQBP1O60828 265 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 ZBED4O75132 1171 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 DUSP11O75319 330 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 MAFAQ8NHW3 353 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 OSBP2Q969R2 916 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 LENG1Q96BZ8 264 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 RNPC3Q96LT9 517 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 STARD7Q9NQZ5 370 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 SYNPO2Q9UMS6 1093 aa15.65■□□□□ 0.1
TRAPPC3-201ENST00000373159 MINDY4BA8MYZ0 360 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 FPGSQ05932 587 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 KCNA10Q16322 511 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 APPBP2Q92624 585 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 SLC38A10Q9HBR0 1119 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 ELP1O95163 1332 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 SYNRGQ9UMZ2 1314 aa15.64■□□□□ 0.09
TRAPPC3-201ENST00000373159 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 RNF113AO15541 343 aaKnown RBP15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 ZFYP08048 801 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 GNAT2P19087 354 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 CST5P28325 142 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 CDK7P50613 346 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 ACVR2BQ13705 512 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 ZNF444Q8N0Y2 327 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 CPXCR1Q8N123 301 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 MYLIPQ8WY64 445 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 ABHD16BQ9H3Z7 469 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 FBXO40Q9UH90 709 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 FEM1BQ9UK73 627 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 CDH23Q9H251 3354 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 PARP14Q460N5 1801 aa15.63■□□□□ 0.09
TRAPPC3-201ENST00000373159 TIMP1P01033 207 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 OAZ1P54368 228 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 DIEXFQ68CQ4 756 aaKnown RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 PCSK9Q8NBP7 692 aaKnown RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 CHST13Q8NET6 341 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 KIFC2Q96AC6 838 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 GLT1D1Q96MS3 346 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 RAVER2Q9HCJ3 691 aaKnown RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 EPB41L4AQ9HCS5 686 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 MTMR4Q9NYA4 1195 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 RCAN3Q9UKA8 241 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 ZHX1Q9UKY1 873 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 TBX21Q9UL17 535 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 CTDP1Q9Y5B0 961 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 MYH8P13535 1937 aa15.62■□□□□ 0.09
TRAPPC3-201ENST00000373159 PRUNE2Q8WUY3 3088 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 PATL2C9JE40 543 aaKnown RBP15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 GPAA1O43292 621 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 TTLL1O95922 423 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 FDX1P10109 184 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 FOSL2P15408 326 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 SLC4A3P48751 1232 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 GJA9P57773 515 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 ANKRD35Q8N283 1001 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 CEP95Q96GE4 821 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 FGD4Q96M96 766 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 UPF3AQ9H1J1 476 aaKnown RBP15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 SPC25Q9HBM1 224 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 MROH7Q68CQ1 1323 aa15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 COL11A1P12107 1806 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC3-201ENST00000373159 MYADML2A6NDP7 307 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 PRDM1O75626 825 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 ASGR1P07306 291 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 C6orf222P0C671 652 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms