RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 NLRP14Q86W24 1093 aa20.44■□□□□ 0.86
MMP9-201ENST00000372330 ALG1Q9BT22 464 aa20.44■□□□□ 0.86
MMP9-201ENST00000372330 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.44■□□□□ 0.86
MMP9-201ENST00000372330 SYNRGQ9UMZ2 1314 aa20.44■□□□□ 0.86
MMP9-201ENST00000372330 POLR2DO15514 142 aaKnown RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 SRGAP2O75044 1071 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 GBP2P32456 591 aaPredicted RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 KRT40Q6A162 431 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 ZNF579Q8NAF0 562 aaKnown RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 MYCBPAPQ8TBZ2 947 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 SERTAD1Q9UHV2 236 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 COL14A1Q05707 1796 aaKnown RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 TNFRSF8P28908 595 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 KRT9P35527 623 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 WASHC4Q2M389 1173 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 CCDC122Q5T0U0 273 aa20.43■□□□□ 0.86
MMP9-201ENST00000372330 ZNF572Q7Z3I7 529 aaPredicted RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 FNBP4Q8N3X1 1017 aaPredicted RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 REXO2Q9Y3B8 237 aaKnown RBP20.43■□□□□ 0.86
MMP9-201ENST00000372330 KAT6BQ8WYB5 2073 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 FOXP2O15409 715 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 SPAG1Q07617 926 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 CUL4BQ13620 913 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 SCARF1Q14162 830 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 NAA25Q14CX7 972 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 CCNHP51946 323 aaPredicted RBP20.42■□□□□ 0.86
MMP9-201ENST00000372330 INHBEP58166 350 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 FAM228AQ86W67 206 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 P3H4Q92791 437 aa20.42■□□□□ 0.86
MMP9-201ENST00000372330 RNPC3Q96LT9 517 aaKnown RBP20.42■□□□□ 0.86
MMP9-201ENST00000372330 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.42■□□□□ 0.86
MMP9-201ENST00000372330 LIMA1Q9UHB6 759 aaKnown RBP20.42■□□□□ 0.86
MMP9-201ENST00000372330 PTPREP23469 700 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 ZAP70P43403 619 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 APPBP2Q92624 585 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 RRP36Q96EU6 259 aaKnown RBP20.41■□□□□ 0.86
MMP9-201ENST00000372330 N4BP3O15049 544 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 PRC1O43663 620 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 MDH1P40925 334 aaKnown RBP20.41■□□□□ 0.86
MMP9-201ENST00000372330 ATP1A2P50993 1020 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
MMP9-201ENST00000372330 PPP4R3AQ6IN85 833 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 TATDN2Q93075 761 aa20.41■□□□□ 0.86
MMP9-201ENST00000372330 TPX2Q9ULW0 747 aaKnown RBP20.41■□□□□ 0.86
MMP9-201ENST00000372330 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
MMP9-201ENST00000372330 AHDC1Q5TGY3 1603 aaPredicted RBP20.4■□□□□ 0.86
MMP9-201ENST00000372330 TRIM29Q14134 588 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 HLFQ16534 295 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 SPECC1Q5M775 1068 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 CD302Q8IX05 232 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 OR8K1Q8NGG5 319 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 SCLT1Q96NL6 688 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 HOMER3Q9NSC5 361 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 TRIM10Q9UDY6 481 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 RIPOR2Q9Y4F9 1068 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
MMP9-201ENST00000372330 FGAP02671 866 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 PDHBP11177 359 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 GCKP35557 465 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 XRCC4Q13426 336 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 SLMAPQ14BN4 828 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 TTLL11Q8NHH1 800 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 SLC4A9Q96Q91 983 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 GPHNQ9NQX3 736 aaPredicted RBP20.39■□□□□ 0.86
MMP9-201ENST00000372330 ITGB4P16144 1822 aa20.39■□□□□ 0.86
MMP9-201ENST00000372330 PDE2AO00408 941 aaPredicted RBP20.39■□□□□ 0.85
MMP9-201ENST00000372330 PRLRP16471 622 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 NR1D1P20393 614 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 TSR1Q2NL82 804 aaKnown RBP20.39■□□□□ 0.85
MMP9-201ENST00000372330 GLE1Q53GS7 698 aaKnown RBP20.39■□□□□ 0.85
MMP9-201ENST00000372330 METTL24Q5JXM2 366 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 LDHAL6AQ6ZMR3 332 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 ARFGAP2Q8N6H7 521 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 AIDAQ96BJ3 306 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 PUS7LQ9H0K6 701 aaKnown RBP20.39■□□□□ 0.85
MMP9-201ENST00000372330 ETAA1Q9NY74 926 aa20.39■□□□□ 0.85
MMP9-201ENST00000372330 IRF6O14896 467 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 ACTN4O43707 911 aaKnown RBP20.38■□□□□ 0.85
MMP9-201ENST00000372330 MGRN1O60291 552 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 ITGA6P23229 1130 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 RWDD2BP57060 319 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 GUCY1A3Q02108 690 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 PI16Q6UXB8 463 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 IQCKQ8N0W5 287 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 ZIM3Q96PE6 472 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 CHP1Q99653 195 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 DISP2A7MBM2 1401 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 COL22A1Q8NFW1 1626 aaPredicted RBP20.38■□□□□ 0.85
MMP9-201ENST00000372330 ANKRD18BA2A2Z9 1011 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 HAND2P61296 217 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 HDLBPQ00341 1268 aaKnown RBP20.38■□□□□ 0.85
MMP9-201ENST00000372330 C2orf54Q08AI8 447 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 LACTB2Q53H82 288 aaPredicted RBP20.38■□□□□ 0.85
MMP9-201ENST00000372330 STK11IPQ8N1F8 1099 aa20.38■□□□□ 0.85
MMP9-201ENST00000372330 TSEN2Q8NCE0 465 aaKnown RBP20.38■□□□□ 0.85
MMP9-201ENST00000372330 GREM2Q9H772 168 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms