RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 USP17L15C9J2P7 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L13C9JLJ4 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L11C9JVI0 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L18D6R9N7 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L22D6RA61 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L17D6RBQ6 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L19D6RCP7 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L20D6RJB6 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 DEXIO95424 95 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 SLC10A3P09131 477 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 GJB2P29033 226 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 AKAP17AQ02040 695 aaKnown RBP18.36■□□□□ 0.53
TMEM53-204ENST00000372243 USP17L24Q0WX57 530 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 SYDE2Q5VT97 1194 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 CATSPERGQ6ZRH7 1159 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 ADGRF4Q8IZF3 695 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
TMEM53-204ENST00000372243 MTMR8Q96EF0 704 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 JMJD4Q9H9V9 463 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-204ENST00000372243 AGTPBP1Q9UPW5 1226 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 PARP14Q460N5 1801 aa18.36■□□□□ 0.53
TMEM53-204ENST00000372243 MYH6P13533 1939 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 MYPNQ86TC9 1320 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 SLC16A2P36021 539 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 IKQ13123 557 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-204ENST00000372243 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.53
TMEM53-204ENST00000372243 GADL1Q6ZQY3 521 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 WASF1Q92558 559 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
TMEM53-204ENST00000372243 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 PRR12Q9ULL5 1215 aa18.35■□□□□ 0.53
TMEM53-204ENST00000372243 V9GY48 417 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-204ENST00000372243 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-204ENST00000372243 FDX1P10109 184 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 TREML2Q5T2D2 321 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 SLC45A1Q9Y2W3 748 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 RLFQ13129 1914 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 RASSF10A6NK89 507 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 FAM155AB1AL88 458 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-204ENST00000372243 FLOT1O75955 427 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 PDIA4P13667 645 aaKnown RBP18.34■□□□□ 0.53
TMEM53-204ENST00000372243 COG2Q14746 738 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 PKN1Q16512 942 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 RGS22Q8NE09 1264 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 PIGSQ96S52 555 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 FBXO28Q9NVF7 368 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 SEC63Q9UGP8 760 aaKnown RBP18.34■□□□□ 0.53
TMEM53-204ENST00000372243 PPP1R9AQ9ULJ8 1098 aa18.34■□□□□ 0.53
TMEM53-204ENST00000372243 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 PNMA6FA0A0J9YX94 578 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 MANSC4A6NHS7 340 aaPredicted RBP18.33■□□□□ 0.52
TMEM53-204ENST00000372243 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 ZBTB5O15062 677 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 CCL15Q16663 113 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
TMEM53-204ENST00000372243 GPAT2Q6NUI2 795 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.52
TMEM53-204ENST00000372243 KIFC2Q96AC6 838 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 RANBP17Q9H2T7 1088 aaKnown RBP18.33■□□□□ 0.52
TMEM53-204ENST00000372243 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 HOXC10Q9NYD6 342 aa18.33■□□□□ 0.52
TMEM53-204ENST00000372243 BAZ2BQ9UIF8 2168 aaKnown RBP18.32■□□□□ 0.52
TMEM53-204ENST00000372243 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 SCG2P13521 617 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 PDCP20941 246 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 DSG3P32926 999 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 INHBEP58166 350 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 ANKRD23Q86SG2 305 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-204ENST00000372243 BRI3BPQ8WY22 251 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 ADAMTS5Q9UNA0 930 aa18.32■□□□□ 0.52
TMEM53-204ENST00000372243 DTNBO60941 627 aa18.31■□□□□ 0.52
TMEM53-204ENST00000372243 DDIT3P35638 169 aa18.31■□□□□ 0.52
TMEM53-204ENST00000372243 MKRN3Q13064 507 aaKnown RBP18.31■□□□□ 0.52
TMEM53-204ENST00000372243 CDC37Q16543 378 aaPredicted RBP18.31■□□□□ 0.52
TMEM53-204ENST00000372243 DEFB115Q30KQ5 88 aa18.31■□□□□ 0.52
TMEM53-204ENST00000372243 LBX2Q6XYB7 198 aa18.31■□□□□ 0.52
TMEM53-204ENST00000372243 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
TMEM53-204ENST00000372243 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
TMEM53-204ENST00000372243 hCG_1642624A0A1W2PR95 340 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 OSBPP22059 807 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 TRAF1Q13077 416 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 SLC38A10Q9HBR0 1119 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
TMEM53-204ENST00000372243 SH3GLB2Q9NR46 395 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-204ENST00000372243 BTBD19C9JJ37 291 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 XBP1P17861 261 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-204ENST00000372243 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
TMEM53-204ENST00000372243 LARP1BQ659C4 914 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms