RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 RSRC2Q7L4I2 434 aaKnown RBP12.73□□□□□ -0.37
PTCH2-201ENST00000372192 JCADQ9P266 1359 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
PTCH2-201ENST00000372192 IBSPP21815 317 aaPredicted RBP12.73□□□□□ -0.37
PTCH2-201ENST00000372192 SLC9C1Q4G0N8 1177 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 CCDC121Q6ZUS5 278 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 TAX1BP1Q86VP1 789 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 CCDC170Q8IYT3 715 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
PTCH2-201ENST00000372192 A0A087WUV0 522 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 USP49Q70CQ1 688 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 FNBP4Q8N3X1 1017 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 LIG3P49916 1009 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 TRIM28Q13263 835 aaKnown RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 MB21D1Q8N884 522 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 GOPCQ9HD26 462 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 PXDNQ92626 1479 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 EIF3CLB5ME19 914 aaKnown RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 CDC25AP30304 524 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 ZBED6P86452 979 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 GRIN1Q05586 938 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 DHTKD1Q96HY7 919 aaPredicted RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 EIF3CQ99613 913 aaKnown RBP12.72□□□□□ -0.37
PTCH2-201ENST00000372192 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 GDAQ9Y2T3 454 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
PTCH2-201ENST00000372192 TRAF5O00463 557 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 CCNT1O60563 726 aaKnown RBP12.71□□□□□ -0.37
PTCH2-201ENST00000372192 CUL4BQ13620 913 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 UBA5Q9GZZ9 404 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 ACTN4O43707 911 aaKnown RBP12.71□□□□□ -0.37
PTCH2-201ENST00000372192 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 USP14P54578 494 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 BEND6Q5SZJ8 279 aaPredicted RBP12.71□□□□□ -0.37
PTCH2-201ENST00000372192 FOXP4Q8IVH2 680 aaPredicted RBP12.71□□□□□ -0.37
PTCH2-201ENST00000372192 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.37
PTCH2-201ENST00000372192 RIPOR2Q9Y4F9 1068 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
PTCH2-201ENST00000372192 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.38
PTCH2-201ENST00000372192 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.38
PTCH2-201ENST00000372192 KRT25Q7Z3Z0 450 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 THAP9Q9H5L6 903 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.38
PTCH2-201ENST00000372192 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.38
PTCH2-201ENST00000372192 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 GSG1L2A8MUP6 293 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 TRIM66O15016 1216 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 SASH3O75995 380 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 MYL1P05976 194 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 ZNF18P17022 549 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 CASP7P55210 303 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 RAPGEF1Q13905 1077 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 ARL6IP4Q66PJ3 421 aaKnown RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 CCDC114Q96M63 670 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 EPHB4P54760 987 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 INF2Q27J81 1249 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 TTC26A0AVF1 554 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 ANKRD65E5RJM6 399 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 SRGAP2O75044 1071 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 GYPCP04921 128 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 RNASE9P60153 205 aaKnown RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 C2orf54Q08AI8 447 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 TBX2Q13207 712 aaPredicted RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 CCDC113Q9H0I3 377 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 ATP2C2O75185 946 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 TXKP42681 527 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 GSTO1P78417 241 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 TFAP4Q01664 338 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 LMBR1Q8WVP7 490 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 DYDC1Q8WWB3 177 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 P2RX5Q93086 422 aa12.7□□□□□ -0.38
PTCH2-201ENST00000372192 CCDC43Q96MW1 224 aaKnown RBP12.7□□□□□ -0.38
PTCH2-201ENST00000372192 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
PTCH2-201ENST00000372192 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
PTCH2-201ENST00000372192 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
PTCH2-201ENST00000372192 CUEDC2Q9H467 287 aa12.69□□□□□ -0.38
PTCH2-201ENST00000372192 VIPAS39Q9H9C1 493 aa12.69□□□□□ -0.38
PTCH2-201ENST00000372192 MAGEF1Q9HAY2 307 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms