RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ARHGEF6Q15052 776 aa14.73□□□□□ -0.05
RAPGEF1-201ENST00000372189 MED23Q9ULK4 1368 aa14.73□□□□□ -0.05
RAPGEF1-201ENST00000372189 GAS7O60861 476 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 RAPGEF1Q13905 1077 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 CIAPIN1Q6FI81 312 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 CCDC17Q96LX7 622 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 KCNK9Q9NPC2 374 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 GOLGA6CA6NDK9 693 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 NDUFAB1O14561 156 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 GOLGA6DP0CG33 693 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 CNGA1P29973 690 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 CCDC117Q8IWD4 279 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 TRIM7Q9C029 511 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 GOLGA6AQ9NYA3 693 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 MTUS1Q9ULD2 1270 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 USP17L3A6NCW0 530 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 USP17L4A6NCW7 530 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 USP17L1Q7RTZ2 530 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 C17orf53Q8N3J3 647 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 TNKSO95271 1327 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 DDAH1O94760 285 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 USP14P54578 494 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 MYCT1Q8N699 235 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 JAKMIP2Q96AA8 810 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 TMEM232C9JQI7 657 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 NLRP12P59046 1061 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 KIFAP3Q92845 792 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 TM6SF1Q9BZW5 370 aa14.72□□□□□ -0.05
RAPGEF1-201ENST00000372189 CALCOCO2Q13137 446 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 CABP7Q86V35 215 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 BIRC2Q13490 618 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 C8orf74Q6P047 294 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 VCXQ9H320 206 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 BSDC1Q9NW68 430 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 IRAK4Q9NWZ3 460 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 CRB1P82279 1406 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 CEP152O94986 1710 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 KLRF2D3W0D1 207 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 PPP1R7Q15435 360 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 ZBTB9Q96C00 473 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 NARFQ9UHQ1 456 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 SSX2IPQ9Y2D8 614 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 POLR2DO15514 142 aaKnown RBP14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 FGAP02671 866 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 CCNA1P78396 465 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 ATP11AP98196 1134 aa14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 INTS8Q75QN2 995 aaKnown RBP14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 NOC4LQ9BVI4 516 aaKnown RBP14.71□□□□□ -0.05
RAPGEF1-201ENST00000372189 ARHGAP6O43182 974 aa14.71□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZNF500O60304 480 aaPredicted RBP14.71□□□□□ -0.06
RAPGEF1-201ENST00000372189 ADRA2BP18089 450 aa14.71□□□□□ -0.06
RAPGEF1-201ENST00000372189 MAP7Q14244 749 aa14.71□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZNF274Q96GC6 653 aaPredicted RBP14.71□□□□□ -0.06
RAPGEF1-201ENST00000372189 KCNG1Q9UIX4 513 aa14.71□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZRANB2O95218 330 aaKnown RBP eCLIP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 VPS41P49754 854 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 FAM47CQ5HY64 1035 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 TPH2Q8IWU9 490 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 CCPG1Q9ULG6 757 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 LEO1Q8WVC0 666 aaPredicted RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 NKIRAS1Q9NYS0 192 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 CASQ2O14958 399 aaPredicted RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 GOLGA8HP0CJ92 632 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 OAS2P29728 719 aaKnown RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 IFT20Q8IY31 132 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 FANCBQ8NB91 859 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 COA1Q9GZY4 146 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 TPX2Q9ULW0 747 aaKnown RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 C21orf2O43822 256 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 ATP2A2P16615 1042 aaKnown RBP14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 ARHGAP25P42331 645 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 VWA3BQ502W6 1294 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 CAMSAP1Q5T5Y3 1602 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 SPATA31A6Q5VVP1 1343 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 STX10O60499 249 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 PTH1RQ03431 593 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 SEL1L2Q5TEA6 688 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 HACE1Q8IYU2 909 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 CCDC63Q8NA47 563 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 MLKLQ8NB16 471 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 TRPC6Q9Y210 931 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 COL15A1P39059 1388 aa14.7□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZMYM6O95789 1325 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 LPXNO60711 386 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 HERC4Q5GLZ8 1057 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 CCDC25Q86WR0 208 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 BLIDQ8IZY5 108 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 CCDC110Q8TBZ0 833 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 RMDN2Q96LZ7 410 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 CETN3O15182 167 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 NT5C3AQ9H0P0 336 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 ATP6V0A2Q9Y487 856 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 ALDH3A1P30838 453 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 CMTR1Q8N1G2 835 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms