RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 CAVIN3Q969G5 261 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 MCM8Q9UJA3 840 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 IQSEC3Q9UPP2 1182 aaPredicted RBP11.23□□□□□ -0.61
HIPK1-206ENST00000369559 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 A1BGP04217 495 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
HIPK1-206ENST00000369559 LSP1P33241 339 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 PREPLQ4J6C6 727 aaPredicted RBP11.23□□□□□ -0.61
HIPK1-206ENST00000369559 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 KLC4Q9NSK0 619 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 ELF1P32519 619 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 TDO2P48775 406 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 SMTNP53814 917 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 NNTQ13423 1086 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 ZNF658Q5TYW1 1059 aaPredicted RBP11.23□□□□□ -0.61
HIPK1-206ENST00000369559 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
HIPK1-206ENST00000369559 SH2D3CQ8N5H7 860 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 SPATA4Q8NEY3 305 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 ZIM3Q96PE6 472 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 STIM2Q9P246 746 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 DUSP10Q9Y6W6 482 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
HIPK1-206ENST00000369559 H7C1D1 291 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 TOM1O60784 492 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 GCP02774 474 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 PPARAQ07869 468 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 ACTN3Q08043 901 aaPredicted RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 CCDC57Q2TAC2 916 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 KCTD16Q68DU8 428 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 CCDC170Q8IYT3 715 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 NHEJ1Q9H9Q4 299 aaPredicted RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 ZNHIT6Q9NWK9 470 aaKnown RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 BMP15O95972 392 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 TNFRSF8P28908 595 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 MCAMP43121 646 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 CCDC40Q4G0X9 1142 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 TRIM58Q8NG06 486 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 ZNF507Q8TCN5 953 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 ZNF473Q8WTR7 871 aaKnown RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 TSGA10Q9BZW7 698 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 RASSF9O75901 435 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 KRT14P02533 472 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 UBE3CQ15386 1083 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 RNF187Q5TA31 235 aaPredicted RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 RMND1Q9NWS8 449 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
HIPK1-206ENST00000369559 PDS5AQ29RF7 1337 aaKnown RBP11.22□□□□□ -0.61
HIPK1-206ENST00000369559 PHKG2P15735 406 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 PRLRP16471 622 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 NF2P35240 595 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 VAV2P52735 878 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 GUCY1A3Q02108 690 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 EMC10Q5UCC4 262 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 CCDC13Q8IYE1 715 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 CNNM2Q9H8M5 875 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 GGA2Q9UJY4 613 aa11.21□□□□□ -0.61
HIPK1-206ENST00000369559 PPP1R37O75864 691 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 EEF1GP26641 437 aaKnown RBP11.21□□□□□ -0.62
HIPK1-206ENST00000369559 PRCPP42785 496 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 MATR3P43243 847 aaKnown RBP eCLIP11.21□□□□□ -0.62
HIPK1-206ENST00000369559 MRPS25P82663 173 aaKnown RBP11.21□□□□□ -0.62
HIPK1-206ENST00000369559 APBA1Q02410 837 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 PTGISQ16647 500 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.62
HIPK1-206ENST00000369559 WLSQ5T9L3 541 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 MAPK8IP1Q9UQF2 711 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 CHD4Q14839 1912 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 SCP2P22307 547 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 CYP27A1Q02318 531 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 WTAPQ15007 396 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 ALX1Q15699 326 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 N4BP2L2Q92802 583 aaPredicted RBP11.21□□□□□ -0.62
HIPK1-206ENST00000369559 MIEF2Q96C03 454 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 MTRQ99707 1265 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 KRT23Q9C075 422 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 VEZTQ9HBM0 779 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 AGPAT5Q9NUQ2 364 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 AXIN2Q9Y2T1 843 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 GDAQ9Y2T3 454 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 ZNF532Q9HCE3 1301 aa11.21□□□□□ -0.62
HIPK1-206ENST00000369559 AKAP11Q9UKA4 1901 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 TMCO5BA8MYB1 307 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 TACC1O75410 805 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 IDH1O75874 414 aaKnown RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 XBP1P17861 261 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms