RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 F5H6K3 240 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 M0R2N6 131 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 NDUFB10O96000 172 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 ECE1P42892 770 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 KLRC3Q07444 240 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
VANGL1-203ENST00000369509 ANO1Q5XXA6 986 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
VANGL1-203ENST00000369509 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 TMX2Q9Y320 296 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 PTPAQ15257 358 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 HEATR3Q7Z4Q2 680 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 HOMER1Q86YM7 354 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 ADGRF4Q8IZF3 695 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 ADARB2Q9NS39 739 aaKnown RBP12.74□□□□□ -0.37
VANGL1-203ENST00000369509 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
VANGL1-203ENST00000369509 ASNSP08243 561 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 CALML3P27482 149 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 SLC1A4P43007 532 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 NLRP5P59047 1200 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
VANGL1-203ENST00000369509 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
VANGL1-203ENST00000369509 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 KIAA1755Q5JYT7 1200 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
VANGL1-203ENST00000369509 ARHGEF10LQ9HCE6 1279 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 PCDHA4Q9UN74 947 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
VANGL1-203ENST00000369509 SMCHD1A6NHR9 2005 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 SLC16A2P36021 539 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 SLC39A14Q15043 492 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 ZNF713Q8N859 430 aaPredicted RBP12.73□□□□□ -0.37
VANGL1-203ENST00000369509 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 ZMYND12Q9H0C1 365 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
VANGL1-203ENST00000369509 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
VANGL1-203ENST00000369509 PTPRFP10586 1907 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 SPTLC2O15270 562 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 PPP1R11O60927 126 aaPredicted RBP12.72□□□□□ -0.37
VANGL1-203ENST00000369509 LIG1P18858 919 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
VANGL1-203ENST00000369509 STK38Q15208 465 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 GALNT17Q6IS24 598 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 RNF214Q8ND24 703 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
VANGL1-203ENST00000369509 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
VANGL1-203ENST00000369509 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
VANGL1-203ENST00000369509 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
VANGL1-203ENST00000369509 PNMA6FA0A0J9YX94 578 aa12.71□□□□□ -0.37
VANGL1-203ENST00000369509 ESYT2A0FGR8 921 aa12.71□□□□□ -0.37
VANGL1-203ENST00000369509 USP17L10C9JJH3 530 aa12.71□□□□□ -0.37
VANGL1-203ENST00000369509 BTNL9Q6UXG8 535 aa12.71□□□□□ -0.37
VANGL1-203ENST00000369509 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
VANGL1-203ENST00000369509 WNT7AO00755 349 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 ZBTB5O15062 677 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.38
VANGL1-203ENST00000369509 PPP6R2O75170 966 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 BMP3P12645 472 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 ME1P48163 572 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 NAPAP54920 295 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 GPR162Q16538 588 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 AXDND1Q5T1B0 1012 aaPredicted RBP12.71□□□□□ -0.38
VANGL1-203ENST00000369509 DCAF15Q66K64 600 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 CCDC12Q8WUD4 166 aaPredicted RBP12.71□□□□□ -0.38
VANGL1-203ENST00000369509 ZNF341Q9BYN7 854 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 VCPKMTQ9H867 229 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.38
VANGL1-203ENST00000369509 PCDHB6Q9Y5E3 794 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 MORC2Q9Y6X9 1032 aaPredicted RBP12.71□□□□□ -0.38
VANGL1-203ENST00000369509 MYH7BA7E2Y1 1941 aa12.71□□□□□ -0.38
VANGL1-203ENST00000369509 GOLGA6L4A6NEF3 574 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 RAD21O60216 631 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 INPP5BP32019 993 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 PRAMEF18Q5VWM3 479 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 ADALQ6DHV7 355 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 GOLPH3LQ9H4A5 285 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 PCDHA6Q9UN73 950 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 PCDHA8Q9Y5H6 950 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 RLFQ13129 1914 aa12.7□□□□□ -0.38
VANGL1-203ENST00000369509 A0A1W2PQ27 194 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 A0A1W2PQ64 194 aa12.69□□□□□ -0.38
VANGL1-203ENST00000369509 A0A1W2PQD8 194 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms