RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 TFRCP02786 760 aaKnown RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 PRCPP42785 496 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 DGKHQ86XP1 1220 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 ELOA2Q8IYF1 753 aaPredicted RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 KCND1Q9NSA2 647 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 RNF225M0QZC1 329 aaPredicted RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 CDK8P49336 464 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 PAK1Q13153 545 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 BIN2Q9UBW5 565 aaPredicted RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 ABL1P00519 1130 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
RAB39B-201ENST00000369454 SYCP1Q15431 976 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 MXD3Q9BW11 206 aa13□□□□□ -0.33
RAB39B-201ENST00000369454 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 LRRC47Q8N1G4 583 aaKnown RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 PMS1P54277 932 aaKnown RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 GTF2IP78347 998 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 PIGSQ96S52 555 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 OGFRQ9NZT2 677 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 SMCO2A6NFE2 343 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 MYO1BO43795 1136 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 SEC31AO94979 1220 aaKnown RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 GYPCP04921 128 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 TECP42680 631 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 KCNJ6P48051 423 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 UBXN1Q04323 297 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 GRM4Q14833 912 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 SMAP1Q8IYB5 467 aaPredicted RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 ZNF446Q9NWS9 450 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 TMEM260Q9NX78 707 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
RAB39B-201ENST00000369454 GGA1Q9UJY5 639 aa12.99□□□□□ -0.33
RAB39B-201ENST00000369454 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 CCDC175P0C221 793 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 CLCN6P51797 869 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 GSTO1P78417 241 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 CDKAL1Q5VV42 579 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 C4orf32Q8N8J7 132 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 STXBP3O00186 592 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 SERPINB2P05120 415 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 LDHCP07864 332 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
RAB39B-201ENST00000369454 COA7Q96BR5 231 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 FEZ1Q99689 392 aa12.98□□□□□ -0.33
RAB39B-201ENST00000369454 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 LRRC15Q8TF66 581 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 MFAP3LO75121 409 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 TPM1P09493 284 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 LONP1P36776 959 aaKnown RBP12.97□□□□□ -0.33
RAB39B-201ENST00000369454 TXKP42681 527 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 SCNN1DP51172 638 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
RAB39B-201ENST00000369454 TXNRD1Q16881 649 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 BARHL2Q9NY43 387 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 SCN7AQ01118 1682 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 ZNF658Q5TYW1 1059 aaPredicted RBP12.97□□□□□ -0.33
RAB39B-201ENST00000369454 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 GJA10Q969M2 543 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 CTAGE1Q96RT6 745 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 SRRTQ9BXP5 876 aaKnown RBP12.97□□□□□ -0.33
RAB39B-201ENST00000369454 SEC63Q9UGP8 760 aaKnown RBP12.97□□□□□ -0.33
RAB39B-201ENST00000369454 FLT1P17948 1338 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
RAB39B-201ENST00000369454 UTRNP46939 3433 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 PLCG1P19174 1290 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 KRT9P35527 623 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 GNAQP50148 359 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
RAB39B-201ENST00000369454 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms