RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 HEATR3Q7Z4Q2 680 aa27.5■■□□□ 1.99
SNX3-203ENST00000368979 CCDC148Q8NFR7 591 aa27.5■■□□□ 1.99
SNX3-203ENST00000368979 BRMS1Q9HCU9 246 aa27.5■■□□□ 1.99
SNX3-203ENST00000368979 NLRP5P59047 1200 aa27.49■■□□□ 1.99
SNX3-203ENST00000368979 BTNL9Q6UXG8 535 aa27.49■■□□□ 1.99
SNX3-203ENST00000368979 SPATA32Q96LK8 384 aa27.49■■□□□ 1.99
SNX3-203ENST00000368979 FTOQ9C0B1 505 aaKnown RBP eCLIP27.49■■□□□ 1.99
SNX3-203ENST00000368979 FZD1Q9UP38 647 aa27.49■■□□□ 1.99
SNX3-203ENST00000368979 CALML3P27482 149 aa27.48■■□□□ 1.99
SNX3-203ENST00000368979 NOL9Q5SY16 702 aaKnown RBP27.48■■□□□ 1.99
SNX3-203ENST00000368979 SPICE1Q8N0Z3 855 aa27.48■■□□□ 1.99
SNX3-203ENST00000368979 TNFRSF25Q93038 417 aa27.48■■□□□ 1.99
SNX3-203ENST00000368979 ISY1Q9ULR0 285 aaKnown RBP27.48■■□□□ 1.99
SNX3-203ENST00000368979 PNMA6FA0A0J9YX94 578 aa27.47■■□□□ 1.99
SNX3-203ENST00000368979 USP17L10C9JJH3 530 aa27.47■■□□□ 1.99
SNX3-203ENST00000368979 GADD45BO75293 160 aaPredicted RBP27.47■■□□□ 1.99
SNX3-203ENST00000368979 DLK2Q6UY11 383 aa27.47■■□□□ 1.99
SNX3-203ENST00000368979 PNMA8AQ86V59 439 aaPredicted RBP27.47■■□□□ 1.99
SNX3-203ENST00000368979 DAGLBQ8NCG7 672 aa27.47■■□□□ 1.99
SNX3-203ENST00000368979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.47■■□□□ 1.999e-8■■□□□ 12.7
SNX3-203ENST00000368979 ZKSCAN4Q969J2 545 aaPredicted RBP27.47■■□□□ 1.99
SNX3-203ENST00000368979 POLR3EQ9NVU0 708 aa27.47■■□□□ 1.99
SNX3-203ENST00000368979 RTEL1Q9NZ71 1219 aa27.47■■□□□ 1.99
SNX3-203ENST00000368979 KLHL40Q2TBA0 621 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 GALNT17Q6IS24 598 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 CCDC12Q8WUD4 166 aaPredicted RBP27.46■■□□□ 1.99
SNX3-203ENST00000368979 KIAA1683Q9H0B3 1180 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 RCOR1Q9UKL0 485 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 PCDHA4Q9UN74 947 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 DDX49Q9Y6V7 483 aaKnown RBP27.46■■□□□ 1.99
SNX3-203ENST00000368979 PHIPQ8WWQ0 1821 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 TMEM232C9JQI7 657 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 ZBTB5O15062 677 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 USP2O75604 605 aaPredicted RBP27.46■■□□□ 1.99
SNX3-203ENST00000368979 NASPP49321 788 aaPredicted RBP27.46■■□□□ 1.99
SNX3-203ENST00000368979 GPT2Q8TD30 523 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 FEZ1Q99689 392 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 WDR18Q9BV38 432 aa27.46■■□□□ 1.99
SNX3-203ENST00000368979 OTOFQ9HC10 1997 aa27.45■■□□□ 1.99
SNX3-203ENST00000368979 PTPRAP18433 802 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 NAPAP54920 295 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 UBE2HP62256 183 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 ZYXQ15942 572 aaKnown RBP27.45■■□□□ 1.98
SNX3-203ENST00000368979 EAPPQ56P03 285 aaPredicted RBP27.45■■□□□ 1.98
SNX3-203ENST00000368979 FAM83BQ5T0W9 1011 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 SYDE2Q5VT97 1194 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 BLIDQ8IZY5 108 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 ZMYND12Q9H0C1 365 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 PICK1Q9NRD5 415 aa27.45■■□□□ 1.98
SNX3-203ENST00000368979 ESYT2A0FGR8 921 aa27.44■■□□□ 1.98
SNX3-203ENST00000368979 M0R2N6 131 aa27.44■■□□□ 1.98
SNX3-203ENST00000368979 PPP1R11O60927 126 aaPredicted RBP27.44■■□□□ 1.98
SNX3-203ENST00000368979 MBD3O95983 291 aa27.44■■□□□ 1.98
SNX3-203ENST00000368979 CEBPZQ03701 1054 aaKnown RBP27.44■■□□□ 1.98
SNX3-203ENST00000368979 CDCA5Q96FF9 252 aa27.44■■□□□ 1.98
SNX3-203ENST00000368979 CLIC4Q9Y696 253 aa27.44■■□□□ 1.98
SNX3-203ENST00000368979 ADAMTS3O15072 1205 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 PLA2G6O60733 806 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 YEATS4O95619 227 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 CDC37Q16543 378 aaPredicted RBP27.43■■□□□ 1.98
SNX3-203ENST00000368979 RILPL1Q5EBL4 403 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 ANO1Q5XXA6 986 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 PPP1R18Q6NYC8 613 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 LPAR1Q92633 364 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 AS3MTQ9HBK9 375 aa27.43■■□□□ 1.98
SNX3-203ENST00000368979 STAT2P52630 851 aa27.42■■□□□ 1.98
SNX3-203ENST00000368979 QRICH1Q2TAL8 776 aa27.42■■□□□ 1.98
SNX3-203ENST00000368979 EARS2Q5JPH6 523 aaKnown RBP27.42■■□□□ 1.98
SNX3-203ENST00000368979 LINC00301Q8NCQ3 95 aa27.42■■□□□ 1.98
SNX3-203ENST00000368979 TOB1P50616 345 aaPredicted RBP27.41■■□□□ 1.98
SNX3-203ENST00000368979 PRKG1Q13976 671 aa27.41■■□□□ 1.98
SNX3-203ENST00000368979 FAM205CA6NFA0 338 aa27.41■■□□□ 1.98
SNX3-203ENST00000368979 WDR46O15213 610 aaKnown RBP27.41■■□□□ 1.98
SNX3-203ENST00000368979 PPP1R12BO60237 982 aaPredicted RBP27.41■■□□□ 1.98
SNX3-203ENST00000368979 IKQ13123 557 aaPredicted RBP27.41■■□□□ 1.98
SNX3-203ENST00000368979 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.41■■□□□ 1.98
SNX3-203ENST00000368979 COA7Q96BR5 231 aa27.41■■□□□ 1.98
SNX3-203ENST00000368979 C6orf50Q9HD87 102 aa27.41■■□□□ 1.98
SNX3-203ENST00000368979 PRR12Q9ULL5 1215 aa27.41■■□□□ 1.98
SNX3-203ENST00000368979 SMCO2A6NFE2 343 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 GNA11P29992 359 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 USP14P54578 494 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 MAP3K9P80192 1104 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 MTMR2Q13614 643 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 FAM160B2Q86V87 743 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 ZNF280CQ8ND82 737 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 PGBD1Q96JS3 809 aa27.4■■□□□ 1.98
SNX3-203ENST00000368979 NF2P35240 595 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 SPP2Q13103 211 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 STK38Q15208 465 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 SF3A1Q15459 793 aaKnown RBP27.39■■□□□ 1.98
SNX3-203ENST00000368979 NOM1Q5C9Z4 860 aaKnown RBP27.39■■□□□ 1.98
SNX3-203ENST00000368979 CHURC1Q8WUH1 139 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 FEM1BQ9UK73 627 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 PCDHA6Q9UN73 950 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 PCDHA8Q9Y5H6 950 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 SNCAIPQ9Y6H5 919 aa27.39■■□□□ 1.98
SNX3-203ENST00000368979 BACE1P56817 501 aa27.38■■□□□ 1.97
SNX3-203ENST00000368979 VGLL4Q14135 290 aa27.38■■□□□ 1.97
SNX3-203ENST00000368979 PTPAQ15257 358 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms