RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 DDAH1O94760 285 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 FMNL1O95466 1100 aaPredicted RBP14.76□□□□□ -0.05
EFNA1-201ENST00000368406 CALM1P0DP23 149 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 CALM2P0DP24 149 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 CALM3P0DP25 149 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 CTGFP29279 349 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 POTEEQ6S8J3 1075 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 RAB11FIP4Q86YS3 637 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 CTCFLQ8NI51 663 aaPredicted RBP14.76□□□□□ -0.05
EFNA1-201ENST00000368406 DCAF4Q8WV16 495 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 ABHD8Q96I13 439 aa14.76□□□□□ -0.05
EFNA1-201ENST00000368406 FRMPD2Q68DX3 1309 aaPredicted RBP14.76□□□□□ -0.05
EFNA1-201ENST00000368406 SPDYE16A6NNV3 312 aaPredicted RBP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 PARP1P09874 1014 aaKnown RBP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 FAM83BQ5T0W9 1011 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 SGMS1Q86VZ5 419 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 CCDC144CPQ8IYA2 1237 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 NUP88Q99567 741 aaPredicted RBP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 TXNRD2Q9NNW7 524 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 DHX16O60231 1041 aaKnown RBP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 FLOT1O75955 427 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 BMP3P12645 472 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 RXRAP19793 462 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 DSG3P32926 999 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 KIF5BP33176 963 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 METAP2P50579 478 aaKnown RBP eCLIP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 ERVK-9P63128 1117 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 ERVK-24P63145 666 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 STK3Q13188 491 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 TOB2Q14106 344 aaPredicted RBP14.75□□□□□ -0.05
EFNA1-201ENST00000368406 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 KCTD1Q719H9 257 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 RASGRP2Q7LDG7 609 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 IL27Q8NEV9 243 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 GMCL1Q96IK5 515 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 SRRDQ9UH36 339 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 ADAMTS5Q9UNA0 930 aa14.75□□□□□ -0.05
EFNA1-201ENST00000368406 RLFQ13129 1914 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 MGAMO43451 1857 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 PDHBP11177 359 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 CCNA1P78396 465 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 Q3C1V9 767 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 ASPRV1Q53RT3 343 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 ALDH8A1Q9H2A2 487 aaPredicted RBP14.74□□□□□ -0.05
EFNA1-201ENST00000368406 BRPF3Q9ULD4 1205 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 HPS5Q9UPZ3 1129 aa14.74□□□□□ -0.05
EFNA1-201ENST00000368406 CTDP1Q9Y5B0 961 aaPredicted RBP14.74□□□□□ -0.05
EFNA1-201ENST00000368406 TMEM232C9JQI7 657 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 TNPO2O14787 897 aaKnown RBP14.73□□□□□ -0.05
EFNA1-201ENST00000368406 CNMDO75829 334 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 GOLGA8HP0CJ92 632 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 MAPK4P31152 587 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 STAT2P52630 851 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 GRM4Q14833 912 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 RTN1Q16799 776 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 GPATCH4Q5T3I0 446 aaKnown RBP14.73□□□□□ -0.05
EFNA1-201ENST00000368406 FBXL16Q8N461 479 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 COA7Q96BR5 231 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 AGXT2Q9BYV1 514 aa14.73□□□□□ -0.05
EFNA1-201ENST00000368406 DOCK3Q8IZD9 2030 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 IFFO2Q5TF58 517 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 PRPF38AQ8NAV1 312 aaKnown RBP14.72□□□□□ -0.05
EFNA1-201ENST00000368406 CHURC1Q8WUH1 139 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 KIFC2Q96AC6 838 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 PAGR1Q9BTK6 254 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 SLKQ9H2G2 1235 aaPredicted RBP14.72□□□□□ -0.05
EFNA1-201ENST00000368406 RBM28Q9NW13 759 aaKnown RBP14.72□□□□□ -0.05
EFNA1-201ENST00000368406 BTBD7Q9P203 1132 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 LIMCH1Q9UPQ0 1083 aa14.72□□□□□ -0.05
EFNA1-201ENST00000368406 ZSWIM8A7E2V4 1837 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 PARP14Q460N5 1801 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 VWA5AO00534 786 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 CPLX1O14810 134 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 PEX10O60683 326 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 PLA2G6O60733 806 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 MCM2P49736 904 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 GNAQP50148 359 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 CCT2P78371 535 aaKnown RBP14.71□□□□□ -0.05
EFNA1-201ENST00000368406 PRKCZQ05513 592 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 TROAPQ12815 778 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 IRF5Q13568 498 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 FAM160B2Q86V87 743 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 CCAR1Q8IX12 1150 aaKnown RBP14.71□□□□□ -0.05
EFNA1-201ENST00000368406 FANCBQ8NB91 859 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 ZNF274Q96GC6 653 aaPredicted RBP14.71□□□□□ -0.05
EFNA1-201ENST00000368406 SLF1Q9BQI6 1058 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 PTCH2Q9Y6C5 1203 aa14.71□□□□□ -0.05
EFNA1-201ENST00000368406 KLRF2D3W0D1 207 aa14.7□□□□□ -0.06
EFNA1-201ENST00000368406 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms