RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PRCPP42785 496 aa20.45■□□□□ 0.86
UBQLN4-201ENST00000368309 FAM196AQ6ZSG2 479 aa20.45■□□□□ 0.86
UBQLN4-201ENST00000368309 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
UBQLN4-201ENST00000368309 RNF225M0QZC1 329 aaPredicted RBP20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 TADA3O75528 432 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 ZNF658Q5TYW1 1059 aaPredicted RBP20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 VAT1LQ9HCJ6 419 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 SH3GLB2Q9NR46 395 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 RWDD2AQ9UIY3 292 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 ADGRG1Q9Y653 693 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 M0R2N6 131 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 MFAP3LO75121 409 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 RASA1P20936 1047 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 ZNF804AQ7Z570 1209 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 ANKS1AQ92625 1134 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 ZHX1Q9UKY1 873 aaPredicted RBP20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
UBQLN4-201ENST00000368309 TRIM49BA6NDI0 452 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 GNAQP50148 359 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 GSTO1P78417 241 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 MAP3K9P80192 1104 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 GPSM2P81274 684 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 NAALADL2Q58DX5 795 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 SRRTQ9BXP5 876 aaKnown RBP20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 DISC1Q9NRI5 854 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 BTDP43251 543 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 KRT222Q8N1A0 295 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 KIFC2Q96AC6 838 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 UBA7P41226 1012 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 PYM1Q9BRP8 204 aaKnown RBP20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 BARHL2Q9NY43 387 aa20.43■□□□□ 0.86
UBQLN4-201ENST00000368309 KCNJ18B7U540 433 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 STXBP3O00186 592 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 KCNJ12Q14500 433 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 EEF2KMTQ96G04 330 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 COPB1P53618 953 aaKnown RBP20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 PPP4CP60510 307 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 TCP11X2Q5H9J9 407 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 LIMA1Q9UHB6 759 aaKnown RBP20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 DLEC1Q9Y238 1755 aa20.42■□□□□ 0.86
UBQLN4-201ENST00000368309 PALM3A6NDB9 673 aaPredicted RBP20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 UFL1O94874 794 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 ZSWIM4Q9H7M6 989 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 ST7Q9NRC1 585 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 LRRC10BA6NIK2 292 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 EFCAB8A8MWE9 144 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 EYA3Q99504 573 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 NUP88Q99567 741 aaPredicted RBP20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 CD209Q9NNX6 404 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 RMND1Q9NWS8 449 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 LDHCP07864 332 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 CDK8P49336 464 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 PMS1P54277 932 aaKnown RBP20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 RPGRQ92834 1020 aaKnown RBP20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 MRFAP1Q9Y605 127 aa20.41■□□□□ 0.86
UBQLN4-201ENST00000368309 PES1O00541 588 aaKnown RBP20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 TOM1O60784 492 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 PPP2R3AQ06190 1150 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 TEX11Q8IYF3 940 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 CCDC148Q8NFR7 591 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 KIAA1551Q9HCM1 1747 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 ABL1P00519 1130 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 LETM2Q2VYF4 491 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 TEX35Q5T0J7 233 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 CNGA4Q8IV77 575 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 ACRBPQ8NEB7 543 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 LRRC15Q8TF66 581 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 NAPAP54920 295 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 NAA15Q9BXJ9 866 aaKnown RBP20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 TCP11L1Q9NUJ3 509 aa20.4■□□□□ 0.86
UBQLN4-201ENST00000368309 TPM1P09493 284 aa20.39■□□□□ 0.86
UBQLN4-201ENST00000368309 UBXN1Q04323 297 aa20.39■□□□□ 0.86
UBQLN4-201ENST00000368309 PRR5LQ6MZQ0 368 aa20.39■□□□□ 0.86
UBQLN4-201ENST00000368309 USP21Q9UK80 565 aa20.39■□□□□ 0.86
UBQLN4-201ENST00000368309 ANKRD20A12PQ8NF67 263 aa20.39■□□□□ 0.85
UBQLN4-201ENST00000368309 CCDC178Q5BJE1 867 aa20.39■□□□□ 0.85
UBQLN4-201ENST00000368309 IRF2BP1Q8IU81 584 aa20.39■□□□□ 0.85
UBQLN4-201ENST00000368309 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
UBQLN4-201ENST00000368309 CCNT1O60563 726 aaKnown RBP20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 SEC31AO94979 1220 aaKnown RBP20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 ERVK-24P63145 666 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 FHOD1Q9Y613 1164 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 CCDC88AQ3V6T2 1871 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 ZNF569Q5MCW4 686 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 UTP14CQ5TAP6 766 aaKnown RBP20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 ADSSL1Q8N142 457 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 SMCO2A6NFE2 343 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 PARP1P09874 1014 aaKnown RBP20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 BMS1Q14692 1282 aaKnown RBP20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 ABHD10Q9NUJ1 306 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 FAM53CQ9NYF3 392 aa20.38■□□□□ 0.85
UBQLN4-201ENST00000368309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.37■□□□□ 0.85
UBQLN4-201ENST00000368309 KRT9P35527 623 aa20.37■□□□□ 0.85
UBQLN4-201ENST00000368309 SPAG1Q07617 926 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms