RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 VPS54Q9P1Q0 977 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 DEKP35659 375 aaKnown RBP18.34■□□□□ 0.53
LMNA-203ENST00000368297 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
LMNA-203ENST00000368297 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
LMNA-203ENST00000368297 HEATR3Q7Z4Q2 680 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 RGS22Q8NE09 1264 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 LPAR1Q92633 364 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 GPKOWQ92917 476 aaPredicted RBP eCLIP18.34■□□□□ 0.531e-9■■■■□ 23.2
LMNA-203ENST00000368297 JMJD4Q9H9V9 463 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 KCNJ14Q9UNX9 436 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 BACE1P56817 501 aa18.33■□□□□ 0.52
LMNA-203ENST00000368297 MAP3K11Q16584 847 aa18.33■□□□□ 0.52
LMNA-203ENST00000368297 SYDE2Q5VT97 1194 aa18.33■□□□□ 0.52
LMNA-203ENST00000368297 CHADLQ6NUI6 762 aa18.33■□□□□ 0.52
LMNA-203ENST00000368297 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
LMNA-203ENST00000368297 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
LMNA-203ENST00000368297 STAT2P52630 851 aa18.32■□□□□ 0.52
LMNA-203ENST00000368297 RESTQ13127 1097 aa18.32■□□□□ 0.52
LMNA-203ENST00000368297 CLMNQ96JQ2 1002 aa18.32■□□□□ 0.52
LMNA-203ENST00000368297 C19orf81C9J6K1 198 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 MMP1P03956 469 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 NLRP5P59047 1200 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 DGKZQ13574 1117 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 WWC2Q6AWC2 1192 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
LMNA-203ENST00000368297 BTNL9Q6UXG8 535 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 GPBP1L1Q9HC44 474 aaPredicted RBP18.31■□□□□ 0.52
LMNA-203ENST00000368297 EMILIN3Q9NT22 766 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 FEM1BQ9UK73 627 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 AFG3L2Q9Y4W6 797 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 PNMA6FA0A0J9YX94 578 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 HMGCS2P54868 508 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 KIF23Q02241 960 aaPredicted RBP18.31■□□□□ 0.52
LMNA-203ENST00000368297 CCDC148Q8NFR7 591 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 OTUD5Q96G74 571 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 SH3GLB2Q9NR46 395 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 LMBRD1Q9NUN5 540 aa18.31■□□□□ 0.52
LMNA-203ENST00000368297 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
LMNA-203ENST00000368297 ZBTB5O15062 677 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
LMNA-203ENST00000368297 CELF2O95319 508 aaKnown RBP18.3■□□□□ 0.52
LMNA-203ENST00000368297 NAPAP54920 295 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
LMNA-203ENST00000368297 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 ERO1BQ86YB8 467 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 DIS3L2Q8IYB7 885 aaKnown RBP18.3■□□□□ 0.52
LMNA-203ENST00000368297 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
LMNA-203ENST00000368297 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 KIFC2Q96AC6 838 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
LMNA-203ENST00000368297 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 PRR12Q9ULL5 1215 aa18.3■□□□□ 0.52
LMNA-203ENST00000368297 STXBP3O00186 592 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 VCAM1P19320 739 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
LMNA-203ENST00000368297 KRT2P35908 639 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 PPATQ06203 517 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 FAM173BQ6P4H8 233 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 RBM46Q8TBY0 533 aaKnown RBP18.29■□□□□ 0.52
LMNA-203ENST00000368297 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 MTMR8Q96EF0 704 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 CHAMP1Q96JM3 812 aa18.29■□□□□ 0.52
LMNA-203ENST00000368297 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
LMNA-203ENST00000368297 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 hCG_1984214I3L0E3 225 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 PLA2G6O60733 806 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 CALML3P27482 149 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 SNAP25P60880 206 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 FKBP1BP68106 108 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 QRICH1Q2TAL8 776 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 LDLRAD1Q5T700 205 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 ZNF713Q8N859 430 aaPredicted RBP18.28■□□□□ 0.52
LMNA-203ENST00000368297 BTBD18B2RXH4 712 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 COA7Q96BR5 231 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 SLC10A4Q96EP9 437 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 C12orf42Q96LP6 360 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 FBXO28Q9NVF7 368 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 MYH15Q9Y2K3 1946 aa18.28■□□□□ 0.52
LMNA-203ENST00000368297 MBD3O95983 291 aa18.27■□□□□ 0.52
LMNA-203ENST00000368297 DNM1Q05193 864 aaKnown RBP18.27■□□□□ 0.52
LMNA-203ENST00000368297 PPIL2Q13356 520 aa18.27■□□□□ 0.52
LMNA-203ENST00000368297 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.52
LMNA-203ENST00000368297 OPTNQ96CV9 577 aa18.27■□□□□ 0.52
LMNA-203ENST00000368297 SLF1Q9BQI6 1058 aa18.27■□□□□ 0.52
LMNA-203ENST00000368297 FOXP1Q9H334 677 aaPredicted RBP18.27■□□□□ 0.52
LMNA-203ENST00000368297 UNCXA6NJT0 531 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 PPP1R11O60927 126 aaPredicted RBP18.26■□□□□ 0.51
LMNA-203ENST00000368297 FLOT1O75955 427 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 ITGBL1O95965 494 aaPredicted RBP18.26■□□□□ 0.51
LMNA-203ENST00000368297 SH3D19Q5HYK7 790 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms