RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PPP1R9AQ9ULJ8 1098 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 VWA5AO00534 786 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 SGSM2O43147 1006 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 NMT2O60551 498 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 BMP3P12645 472 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 XRCC5P13010 732 aaKnown RBP11.63□□□□□ -0.55
CD48-202ENST00000368046 CYP2B6P20813 491 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 PTPREP23469 700 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 MORN1Q5T089 497 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 RCSD1Q6JBY9 416 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
CD48-202ENST00000368046 SHCBP1Q8NEM2 672 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 USP6NLQ92738 828 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
CD48-202ENST00000368046 MOV10L1Q9BXT6 1211 aaKnown RBP11.63□□□□□ -0.55
CD48-202ENST00000368046 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 MROH8Q9H579 483 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 FEM1BQ9UK73 627 aa11.63□□□□□ -0.55
CD48-202ENST00000368046 SLC15A5A6NIM6 579 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 ZBED4O75132 1171 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 SLC25A27O95847 323 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 MYCP01106 439 aaPredicted RBP11.62□□□□□ -0.55
CD48-202ENST00000368046 FDX1P10109 184 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 TOP1P11387 765 aaKnown RBP11.62□□□□□ -0.55
CD48-202ENST00000368046 ELNP15502 786 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 ERCC3P19447 782 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 MCCP23508 829 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 STAT3P40763 770 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 MLLT1Q03111 559 aaPredicted RBP11.62□□□□□ -0.55
CD48-202ENST00000368046 PLS1Q14651 629 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 WDR78Q5VTH9 848 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 TBC1D10CQ8IV04 446 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
CD48-202ENST00000368046 CHURC1Q8WUH1 139 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 SOCS4Q8WXH5 440 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 MAP4K1Q92918 833 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 SLF1Q9BQI6 1058 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 IVNS1ABPQ9Y6Y0 642 aa11.62□□□□□ -0.55
CD48-202ENST00000368046 TMEM232C9JQI7 657 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 PLA2G6O60733 806 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 CCL5P13501 91 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 RGS2P41220 211 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 SLC1A4P43007 532 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 PTH1RQ03431 593 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 MAP2K5Q13163 448 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 MTFR1Q15390 333 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 KIAA1211Q6ZU35 1233 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 SKAP1Q86WV1 359 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 IQCA1Q86XH1 822 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 DGKHQ86XP1 1220 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 REPS2Q8NFH8 660 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 KRT23Q9C075 422 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 CNNM2Q9H8M5 875 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 ZSWIM5Q9P217 1185 aa11.61□□□□□ -0.55
CD48-202ENST00000368046 ATP2A1O14983 1001 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 KDM4AO75164 1064 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 HMGCRP04035 888 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 INHAP05111 366 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 GJB1P08034 283 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 HOXC6P09630 235 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 CAPN2P17655 700 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 EN2P19622 333 aaPredicted RBP11.6□□□□□ -0.55
CD48-202ENST00000368046 GRB14Q14449 540 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 FAM160B2Q86V87 743 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 NCAPG2Q86XI2 1143 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 ABRAQ8N0Z2 381 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 ANKS1AQ92625 1134 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 PPP4R2Q9NY27 417 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 ZNF214Q9UL59 606 aaPredicted RBP11.6□□□□□ -0.55
CD48-202ENST00000368046 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
CD48-202ENST00000368046 NEDD4P46934 1319 aa11.6□□□□□ -0.55
CD48-202ENST00000368046 B4E1Z4 1266 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 CYP21A2P08686 494 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 FCER1AP12319 257 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 COPB2P35606 906 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 STAT2P52630 851 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 TRDNQ13061 729 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 DPP9Q86TI2 863 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 ZSCAN10Q96SZ4 725 aaPredicted RBP11.59□□□□□ -0.55
CD48-202ENST00000368046 ZKSCAN3Q9BRR0 538 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 ESYT1Q9BSJ8 1104 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 SLC38A10Q9HBR0 1119 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 SLC5A4Q9NY91 659 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 RPTORQ8N122 1335 aa11.59□□□□□ -0.55
CD48-202ENST00000368046 GREB1LQ9C091 1923 aaPredicted RBP11.58□□□□□ -0.55
CD48-202ENST00000368046 ZSWIM8A7E2V4 1837 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 SGPL1O95470 568 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 ADORA2AP29274 412 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 GJA8P48165 433 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms