RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 KIAA1755Q5JYT7 1200 aa18.14■□□□□ 0.49
CNIH4-204ENST00000366860 BTNL9Q6UXG8 535 aa18.14■□□□□ 0.49
CNIH4-204ENST00000366860 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
CNIH4-204ENST00000366860 NSUN7Q8NE18 718 aaKnown RBP18.14■□□□□ 0.49
CNIH4-204ENST00000366860 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
CNIH4-204ENST00000366860 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.49
CNIH4-204ENST00000366860 RBBP6Q7Z6E9 1792 aaKnown RBP18.13■□□□□ 0.49
CNIH4-204ENST00000366860 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
CNIH4-204ENST00000366860 RASSF10A6NK89 507 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L15C9J2P7 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L13C9JLJ4 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L11C9JVI0 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L18D6R9N7 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L22D6RA61 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L17D6RBQ6 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L19D6RCP7 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L20D6RJB6 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 USP17L24Q0WX57 530 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 NTRK3Q16288 839 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 WASF1Q92558 559 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 IPO9Q96P70 1041 aaKnown RBP18.13■□□□□ 0.49
CNIH4-204ENST00000366860 SLF1Q9BQI6 1058 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 SEC63Q9UGP8 760 aaKnown RBP18.13■□□□□ 0.49
CNIH4-204ENST00000366860 PNMA3Q9UL41 463 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
CNIH4-204ENST00000366860 COL11A1P12107 1806 aaPredicted RBP18.12■□□□□ 0.49
CNIH4-204ENST00000366860 CCL15-CCL14A0A0B4J2E2 113 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 FLOT1O75955 427 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 DEXIO95424 95 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 FMNL1O95466 1100 aaPredicted RBP18.12■□□□□ 0.49
CNIH4-204ENST00000366860 FDX1P10109 184 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 SSRP1Q08945 709 aaKnown RBP18.12■□□□□ 0.49
CNIH4-204ENST00000366860 SREBF2Q12772 1141 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 DGKZQ13574 1117 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 CCL15Q16663 113 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 PAXIP1Q6ZW49 1069 aaPredicted RBP18.12■□□□□ 0.49
CNIH4-204ENST00000366860 SRBD1Q8N5C6 995 aaKnown RBP18.12■□□□□ 0.49
CNIH4-204ENST00000366860 SMARCC2Q8TAQ2 1214 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 RRP36Q96EU6 259 aaKnown RBP18.12■□□□□ 0.49
CNIH4-204ENST00000366860 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 RIOX1Q9H6W3 641 aa18.12■□□□□ 0.49
CNIH4-204ENST00000366860 hCG_1984214I3L0E3 225 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 CTDNEP1O95476 244 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 HOXA7P31268 230 aaPredicted RBP18.11■□□□□ 0.49
CNIH4-204ENST00000366860 IRX3P78415 501 aaPredicted RBP18.11■□□□□ 0.49
CNIH4-204ENST00000366860 FUT2Q10981 343 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 NBPF11Q86T75 865 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 ZNF713Q8N859 430 aaPredicted RBP18.11■□□□□ 0.49
CNIH4-204ENST00000366860 FAM184AQ8NB25 1140 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 MS4A4AQ96JQ5 239 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 ZCCHC17Q9NP64 241 aaKnown RBP18.11■□□□□ 0.49
CNIH4-204ENST00000366860 PNMA2Q9UL42 364 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 PPP1R9AQ9ULJ8 1098 aa18.11■□□□□ 0.49
CNIH4-204ENST00000366860 PRPF3O43395 683 aaKnown RBP18.1■□□□□ 0.49
CNIH4-204ENST00000366860 OSBPP22059 807 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 INHBEP58166 350 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 MKRN3Q13064 507 aaKnown RBP18.1■□□□□ 0.49
CNIH4-204ENST00000366860 TRAF1Q13077 416 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 NOGQ13253 232 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 TREML2Q5T2D2 321 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 TTBK2Q6IQ55 1244 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 CATSPERGQ6ZRH7 1159 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 ANKRD23Q86SG2 305 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 ADGRF4Q8IZF3 695 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 PRPF38AQ8NAV1 312 aaKnown RBP18.1■□□□□ 0.49
CNIH4-204ENST00000366860 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
CNIH4-204ENST00000366860 PHKBQ93100 1093 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 UBA5Q9GZZ9 404 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
CNIH4-204ENST00000366860 PRR12Q9ULL5 1215 aa18.1■□□□□ 0.49
CNIH4-204ENST00000366860 TESPA1A2RU30 521 aaPredicted RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 FAM155AB1AL88 458 aaPredicted RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 CYTH3O43739 400 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 JAK2O60674 1132 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 PDCP20941 246 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 GJB2P29033 226 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 SLC16A2P36021 539 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 MOGSQ13724 837 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 CDC37Q16543 378 aaPredicted RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 DEFB115Q30KQ5 88 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 REM2Q8IYK8 340 aaPredicted RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 FAM177A1Q8N128 213 aaPredicted RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 CMTR1Q8N1G2 835 aaKnown RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 CCDC82Q8N4S0 544 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 KIFC2Q96AC6 838 aa18.09■□□□□ 0.49
CNIH4-204ENST00000366860 CWC22Q9HCG8 908 aaKnown RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
CNIH4-204ENST00000366860 ZBTB5O15062 677 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 PDIA4P13667 645 aaKnown RBP18.08■□□□□ 0.48
CNIH4-204ENST00000366860 XBP1P17861 261 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 COG2Q14746 738 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 HOMER1Q86YM7 354 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 MB21D1Q8N884 522 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 MTMR8Q96EF0 704 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 DDX11Q96FC9 970 aa18.08■□□□□ 0.48
CNIH4-204ENST00000366860 PARK7Q99497 189 aaKnown RBP18.08■□□□□ 0.48
CNIH4-204ENST00000366860 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.48
CNIH4-204ENST00000366860 JMJD4Q9H9V9 463 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms