RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PLCD4Q9BRC7 762 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 MKRN2Q9H000 416 aaKnown RBP4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 CNNM2Q9H8M5 875 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 EHMT1Q9H9B1 1298 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 PARD6AQ9NPB6 346 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 CHST7Q9NS84 486 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 SIRT5Q9NXA8 310 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 UBP1Q9NZI7 540 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 MBD1Q9UIS9 605 aaPredicted RBP4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 MINPP1Q9UNW1 487 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 GPR55Q9Y2T6 319 aaPredicted RBP4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 IRAK3Q9Y616 596 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 TAF6LQ9Y6J9 622 aa4.34□□□□□ -1.71
RNU4-42P-201ENST00000364738 MEIS1O00470 390 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 PNLIPP16233 465 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 CCNFP41002 786 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 EPHB3P54753 998 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 CLCQ05315 142 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 OLFML2BQ68BL8 750 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 TMEM151BQ8IW70 566 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 GIPC2Q8TF65 315 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 SLC6A18Q96N87 628 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 BCL2L13Q9BXK5 485 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 TNFRSF10DQ9UBN6 386 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 ADAMTS1Q9UHI8 967 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 PCDHB12Q9Y5F1 795 aa4.33□□□□□ -1.72
RNU4-42P-201ENST00000364738 FADS2P1A8MWK0 482 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 TRIM13O60858 407 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 NME1P15531 152 aaKnown RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 ENDOUP21128 410 aaKnown RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 VIPR1P32241 457 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 ARL4AP40617 200 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 BUD31P41223 144 aaPredicted RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 ZNF165P49910 485 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 LRRFIP1Q32MZ4 808 aaKnown RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 HSF5Q4G112 596 aaPredicted RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 GALNT18Q6P9A2 607 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 TMEM192Q8IY95 271 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 REXO1Q8N1G1 1221 aaKnown RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 KCNC2Q96PR1 638 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 CDADC1Q9BWV3 514 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 GZF1Q9H116 711 aaPredicted RBP4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 BCL11AQ9H165 835 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 ANTXR1Q9H6X2 564 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 ERVK13-1Q9NX77 482 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 GFOD1Q9NXC2 390 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 FBXL21Q9UKT6 434 aa4.32□□□□□ -1.72
RNU4-42P-201ENST00000364738 FAM86C2PA6NEL3 165 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 WTIPA6NIX2 430 aaPredicted RBP4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 MEIS3P2A8K0S8 358 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 TNFRSF10CO14798 259 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 N4BP3O15049 544 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 ZNF205O95201 554 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 MPOP05164 745 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 BMP8BP34820 402 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 AFF3P51826 1226 aaKnown RBP4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 YBX1P67809 324 aaKnown RBP4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 MRPL58Q14197 206 aaKnown RBP4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 KIR3DS1Q14943 382 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 ZNF326Q5BKZ1 582 aaKnown RBP4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 CRTC3Q6UUV7 619 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 PANK1Q8TE04 598 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 C20orf173Q96LM9 149 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 CNTD2Q9H8S5 307 aa4.31□□□□□ -1.72
RNU4-42P-201ENST00000364738 A0A0G2JLL6 359 aaPredicted RBP4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 NUDT19A8MXV4 375 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 ABLIM1O14639 778 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 PRKCAP17252 672 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 CTSKP43235 329 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 ERVFRD-1P60508 538 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 TMEM62Q0P6H9 643 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 AUHQ13825 339 aaKnown RBP4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 RAB3GAP1Q15042 981 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 TMC6Q7Z403 805 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 SLCO6A1Q86UG4 719 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 KIAA0825Q8IV33 1275 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 MARCH10Q8NA82 808 aaPredicted RBP4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 NUP43Q8NFH3 380 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 NKD1Q969G9 470 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 RELTQ969Z4 430 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 SLC9A7Q96T83 725 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 DSCC1Q9BVC3 393 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
RNU4-42P-201ENST00000364738 A0A1W2PQ45 241 aaPredicted RBP4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 A0A1W2PQY0 241 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 IRS4O14654 1257 aaPredicted RBP4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 SASH1O94885 1247 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 VAV1P15498 845 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 CDR1P51861 262 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 CYP4F8P98187 520 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 LAPTM5Q13571 262 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 SLITRK4Q8IW52 837 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 CCDC144CPQ8IYA2 1237 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 NAT16Q8N8M0 369 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 MZB1Q8WU39 189 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 DACT3Q96B18 629 aaPredicted RBP4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 DHRS1Q96LJ7 313 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 SPON2Q9BUD6 331 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms