RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 ARNTP27540 789 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 MZF1P28698 734 aaPredicted RBP1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 CAP2P40123 477 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 CYP4F8P98187 520 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 NR1I3Q14994 352 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 KANK4Q5T7N3 995 aaPredicted RBP1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 KIAA0319Q5VV43 1072 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 PRAMEF13Q5VWM6 474 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 GALNT18Q6P9A2 607 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 WAPLQ7Z5K2 1190 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 SULF2Q8IWU5 870 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 NOX5Q96PH1 765 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 TTPALQ9BTX7 342 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 MMRN2Q9H8L6 949 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 TNFRSF12AQ9NP84 129 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 CACNA2D2Q9NY47 1150 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 TFIP11Q9UBB9 837 aaKnown RBP1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 HCFC2Q9Y5Z7 792 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 NOTCH2Q04721 2471 aa1.23□□□□□ -2.21
RNU6-340P-201ENST00000364005 U2SURPO15042 1029 aaKnown RBP1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 CST3P01034 146 aaPredicted RBP1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 ACRP10323 421 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 NCAM1P13591 858 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 KRT4P19013 534 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 ETV3P41162 512 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 HAP1P54257 671 aaPredicted RBP1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 PPP2R3AQ06190 1150 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 OCLNQ16625 522 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 FAM26FQ5R3K3 315 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 FNDC7Q5VTL7 733 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 MCTP2Q6DN12 878 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 B3GNT8Q7Z7M8 397 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 GALNT12Q8IXK2 581 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 DTWD2Q8NBA8 298 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 FAM200AQ8TCP9 573 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 DDX11Q96FC9 970 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 ADOQ96SZ5 270 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 PTPN18Q99952 460 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 RNF38Q9H0F5 515 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 EHD4Q9H223 541 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 JADE2Q9NQC1 790 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 TMEM39AQ9NV64 488 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 KCNH3Q9ULD8 1083 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 MAFBQ9Y5Q3 323 aaPredicted RBP1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 TAF6LQ9Y6J9 622 aa1.22□□□□□ -2.21
RNU6-340P-201ENST00000364005 PRAMEF27A3QJZ7 478 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 WTIPA6NIX2 430 aaPredicted RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 POM121CA8CG34 1229 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 FOXN1O15353 648 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 SMARCA5O60264 1052 aaPredicted RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 LRRN2O75325 713 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 ASGR2P07307 311 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 C1SP09871 688 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 CD38P28907 300 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 PPP2CBP62714 309 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 PPP2CAP67775 309 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZNF252P-AS1Q0IIN9 211 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 SMAD4Q13485 552 aaKnown RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 HSF5Q4G112 596 aaPredicted RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 HS1BP3Q53T59 392 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 C9orf131Q5VYM1 1079 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 PLEKHH3Q7Z736 793 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 PRIMA1Q86XR5 153 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 HID1Q8IV36 788 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 TXNDC5Q8NBS9 432 aaKnown RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 ELMO3Q96BJ8 720 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZBTB8AQ96BR9 441 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 BBC3Q96PG8 261 aaPredicted RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 PLEKHG4BQ96PX9 1271 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 PRRX2Q99811 253 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 CBX8Q9HC52 389 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 ABCB6Q9NP58 842 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 SLC2A4RGQ9NR83 387 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 GPN3Q9UHW5 284 aaPredicted RBP1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 POLIQ9UNA4 740 aa1.21□□□□□ -2.22
RNU6-340P-201ENST00000364005 CNTNAP2Q9UHC6 1331 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 TMEM238LA0A1B0GVL6 79 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 SHISA3A0PJX4 238 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 TMEM82A0PJX8 343 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 MAKP20794 623 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 EPHB4P54760 987 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 SCRN1Q12765 414 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 FSTL1Q12841 308 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 KRTAP27-1Q3LI81 207 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 NOM1Q5C9Z4 860 aaKnown RBP1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 AMER1Q5JTC6 1135 aaPredicted RBP1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 RNF111Q6ZNA4 994 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 Q6ZPA2 131 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 ULK2Q8IYT8 1036 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 USHBP1Q8N6Y0 703 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZNF366Q8N895 744 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 NUP43Q8NFH3 380 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 GPR150Q8NGU9 434 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 GRIN3AQ8TCU5 1115 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 LCORQ96JN0 433 aaPredicted RBP1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 EMILIN2Q9BXX0 1053 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 WNT10AQ9GZT5 417 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 RIOX1Q9H6W3 641 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 VRTNQ9H8Y1 702 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms