RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 EAF1Q96JC9 268 aaPredicted RBP1.5□□□□□ -2.17
RNU6-478P-201ENST00000363904 LCORQ96JN0 433 aaPredicted RBP1.5□□□□□ -2.17
RNU6-478P-201ENST00000363904 SPATA6Q9NWH7 488 aaPredicted RBP1.5□□□□□ -2.17
RNU6-478P-201ENST00000363904 ANKRD33BA6NCL7 494 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 TMEM191CA6NGB0 347 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 WTIPA6NIX2 430 aaPredicted RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 RBAK-RBAKDNI3L0D1 243 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 U2SURPO15042 1029 aaKnown RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 PRKCAP17252 672 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 MC3RP41968 323 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 SLBPQ14493 270 aaKnown RBP eCLIP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 NAA30Q147X3 362 aaPredicted RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 RPS26P11Q5JNZ5 115 aaPredicted RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 B3GNT8Q7Z7M8 397 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 PDZD3Q86UT5 571 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 PRIMA1Q86XR5 153 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 SCARB1Q8WTV0 552 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 SMG7Q92540 1137 aaKnown RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 ELMO3Q96BJ8 720 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 TNFRSF12AQ9NP84 129 aa1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 FOXD3Q9UJU5 478 aaPredicted RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 REXO2Q9Y3B8 237 aaKnown RBP1.49□□□□□ -2.17
RNU6-478P-201ENST00000363904 SSU72P8A0A1W2PR75 194 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 FOXN1O15353 648 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 B4GALT3O60512 393 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 C1SP09871 688 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 PPP2CBP62714 309 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 PPP2CAP67775 309 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 PTPN12Q05209 780 aaKnown RBP1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 SMAD4Q13485 552 aaKnown RBP1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 KIR3DS1Q14943 382 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 CLEC16AQ2KHT3 1053 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 SLFN13Q68D06 897 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 C1orf210Q8IVY1 113 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 WWC1Q8IX03 1113 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 NUP43Q8NFH3 380 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 HHIPL1Q96JK4 782 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 ADGRE3Q9BY15 652 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 VPS33BQ9H267 617 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 FBRSQ9HAH7 460 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 CBX8Q9HC52 389 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 RNF7Q9UBF6 113 aa1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 GPN3Q9UHW5 284 aaPredicted RBP1.48□□□□□ -2.17
RNU6-478P-201ENST00000363904 PRAMEF27A3QJZ7 478 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L15C9J2P7 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L10C9JJH3 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L13C9JLJ4 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L12C9JPN9 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L11C9JVI0 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L21D6R901 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L18D6R9N7 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L22D6RA61 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L17D6RBQ6 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L19D6RCP7 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L20D6RJB6 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 PDGFAP04085 211 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 EPHB4P54760 987 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 USP17L24Q0WX57 530 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 HSF5Q4G112 596 aaPredicted RBP1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 PRAMEF13Q5VWM6 474 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 C9orf131Q5VYM1 1079 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 LAIR1Q6GTX8 287 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 RNF111Q6ZNA4 994 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 HDGFL2Q7Z4V5 671 aaPredicted RBP1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 ADGRG3Q86Y34 549 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 SULF2Q8IWU5 870 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 ULK2Q8IYT8 1036 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 DTWD2Q8NBA8 298 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 TXNDC5Q8NBS9 432 aaKnown RBP1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 CLIP3Q96DZ5 547 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 PRIMPOLQ96LW4 560 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 BBC3Q96PG8 261 aaPredicted RBP1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 NOX5Q96PH1 765 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 EMILIN2Q9BXX0 1053 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 EHD4Q9H223 541 aa1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 DBR1Q9UK59 544 aaKnown RBP1.47□□□□□ -2.17
RNU6-478P-201ENST00000363904 NOTCH2Q04721 2471 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 A0A1W2PQ27 194 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 A0A1W2PQ64 194 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 A0A1W2PQC6 194 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 A0A1W2PQD8 194 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 CST3P01034 146 aaPredicted RBP1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 ASGR2P07307 311 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 ACRP10323 421 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 RPL13P26373 211 aaKnown RBP1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 ARNTP27540 789 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 CAP2P40123 477 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 KRTAP10-5P60370 271 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 ETF1P62495 437 aaKnown RBP1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 NKG7Q16617 165 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 STRIP1Q5VSL9 837 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 CRELD2Q6UXH1 353 aaPredicted RBP1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 HID1Q8IV36 788 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 FIBCD1Q8N539 461 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 SMARCC2Q8TAQ2 1214 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 ALG3Q92685 438 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 MKNK1Q9BUB5 465 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 ZFYVE28Q9HCC9 887 aa1.46□□□□□ -2.18
RNU6-478P-201ENST00000363904 TMEM39AQ9NV64 488 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms