RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ATP2B4P23634 1241 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 SAFBQ15424 915 aaKnown RBP eCLIP21.41■■□□□ 1.02
CMTM3-201ENST00000361909 WWC2Q6AWC2 1192 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 TMED8Q6PL24 325 aaPredicted RBP21.41■■□□□ 1.02
CMTM3-201ENST00000361909 CCDC125Q86Z20 511 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 STK11IPQ8N1F8 1099 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 ACTN4O43707 911 aaKnown RBP21.41■■□□□ 1.02
CMTM3-201ENST00000361909 ALDH1B1P30837 517 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 HAND2P61296 217 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 APOA5Q6Q788 366 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 RPAINQ86UA6 219 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 ZFP91Q96JP5 570 aaPredicted RBP21.41■■□□□ 1.02
CMTM3-201ENST00000361909 DRC1Q96MC2 740 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 MED15Q96RN5 788 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 SERTAD1Q9UHV2 236 aa21.41■■□□□ 1.02
CMTM3-201ENST00000361909 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 PSMD14O00487 310 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 POLR2DO15514 142 aaKnown RBP21.4■■□□□ 1.02
CMTM3-201ENST00000361909 PHACTR2O75167 634 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 PRR29P0C7W0 189 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 ARHGAP25P42331 645 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 MMP14P50281 582 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 SPAG1Q07617 926 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 TRAPPC11Q7Z392 1133 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 SP8Q8IXZ3 490 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 NOA1Q8NC60 698 aaKnown RBP21.4■■□□□ 1.02
CMTM3-201ENST00000361909 MYH13Q9UKX3 1938 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 TEX33O43247 280 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 ERLIN2O94905 339 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 KLRK1P26718 216 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 STIM1Q13586 685 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 MAGEB6Q8N7X4 407 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 EHBP1Q8NDI1 1231 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 FAM76AQ8TAV0 307 aa21.4■■□□□ 1.02
CMTM3-201ENST00000361909 MYH8P13535 1937 aa21.39■■□□□ 1.02
CMTM3-201ENST00000361909 GYPCP04921 128 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 CASP14P31944 242 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 GPSM2P81274 684 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 CUL4BQ13620 913 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 SGMS1Q86VZ5 419 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 AIFM3Q96NN9 605 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 CRACR2AQ9BSW2 395 aa21.39■■□□□ 1.01
CMTM3-201ENST00000361909 FOXP1Q9H334 677 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-201ENST00000361909 SRPRBQ9Y5M8 271 aaKnown RBP21.39■■□□□ 1.01
CMTM3-201ENST00000361909 ZC3H4Q9UPT8 1303 aaKnown RBP21.39■■□□□ 1.01
CMTM3-201ENST00000361909 COL1A1P02452 1464 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-201ENST00000361909 EBAG9O00559 213 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 ZBTB43O43298 467 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 NTRK3Q16288 839 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 ZNF662Q6ZS27 426 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 ABHD10Q9NUJ1 306 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 GSCP56915 257 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-201ENST00000361909 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 IQCEQ6IPM2 695 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 MICALL1Q8N3F8 863 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 TACO1Q9BSH4 297 aaKnown RBP21.38■■□□□ 1.01
CMTM3-201ENST00000361909 HAUS4Q9H6D7 363 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 GGA1Q9UJY5 639 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 ATP6V0A2Q9Y487 856 aa21.38■■□□□ 1.01
CMTM3-201ENST00000361909 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-201ENST00000361909 DEFB132Q7Z7B7 95 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 TXNRD3Q86VQ6 643 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 AIDAQ96BJ3 306 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 FMNL1O95466 1100 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-201ENST00000361909 MMP1P03956 469 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 SSRP1Q08945 709 aaKnown RBP21.37■■□□□ 1.01
CMTM3-201ENST00000361909 PPFIA1Q13136 1202 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 ZNF804AQ7Z570 1209 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 ACRBPQ8NEB7 543 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 GSDMAQ96QA5 445 aa21.37■■□□□ 1.01
CMTM3-201ENST00000361909 STRBPQ96SI9 672 aaKnown RBP21.37■■□□□ 1.01
CMTM3-201ENST00000361909 LIMA1Q9UHB6 759 aaKnown RBP21.37■■□□□ 1.01
CMTM3-201ENST00000361909 SPATS2Q86XZ4 545 aaKnown RBP21.36■■□□□ 1.01
CMTM3-201ENST00000361909 ANKRD20A12PQ8NF67 263 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 ABCF2Q9UG63 623 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 LTBP1Q14766 1721 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 SHTN1A0MZ66 631 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 GOLGA8AA7E2F4 631 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 GNAT2P19087 354 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 AKAP17AQ02040 695 aaKnown RBP21.36■■□□□ 1.01
CMTM3-201ENST00000361909 RAB11FIP4Q86YS3 637 aa21.36■■□□□ 1.01
CMTM3-201ENST00000361909 A0A0U1RQJ8 604 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 LRRC10BA6NIK2 292 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 FXR1P51114 621 aaKnown RBP eCLIP21.35■■□□□ 1.01
CMTM3-201ENST00000361909 ERVK-24P63145 666 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 ALX1Q15699 326 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 PAPD7Q5XG87 772 aaKnown RBP21.35■■□□□ 1.01
CMTM3-201ENST00000361909 CCDC70Q6NSX1 233 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 CPLX3Q8WVH0 158 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 ATRIPQ8WXE1 791 aa21.35■■□□□ 1.01
CMTM3-201ENST00000361909 AATFQ9NY61 560 aaKnown RBP eCLIP21.35■■□□□ 1.01
CMTM3-201ENST00000361909 UFL1O94874 794 aa21.34■■□□□ 1.01
CMTM3-201ENST00000361909 LIFRP42702 1097 aa21.34■■□□□ 1.01
CMTM3-201ENST00000361909 SLC16A10Q8TF71 515 aa21.34■■□□□ 1.01
CMTM3-201ENST00000361909 COL11A2P13942 1736 aaPredicted RBP21.34■■□□□ 1.01
CMTM3-201ENST00000361909 PATL2C9JE40 543 aaKnown RBP21.34■■□□□ 1.01
CMTM3-201ENST00000361909 IFNAR1P17181 557 aa21.34■■□□□ 1.01
CMTM3-201ENST00000361909 TOB1P50616 345 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms