RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ERCC5P28715 1186 aaPredicted RBP14.93□□□□□ -0.02
LDB3-202ENST00000361373 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
LDB3-202ENST00000361373 MMP10P09238 476 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 SFMBT2Q5VUG0 894 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 NELFCDQ8IXH7 590 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 CAPZA3Q96KX2 299 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 ADPGKQ9BRR6 497 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 RBSNQ9H1K0 784 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 TAB2Q9NYJ8 693 aa14.93□□□□□ -0.02
LDB3-202ENST00000361373 FMNL1O95466 1100 aaPredicted RBP14.92□□□□□ -0.02
LDB3-202ENST00000361373 LIFRP42702 1097 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 CBX1P83916 185 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 CIAPIN1Q6FI81 312 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 SECISBP2LQ93073 1101 aaKnown RBP14.92□□□□□ -0.02
LDB3-202ENST00000361373 HAUS2Q9NVX0 235 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 AFF2P51816 1311 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 GLI2P10070 1586 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 STK10O94804 968 aaKnown RBP14.92□□□□□ -0.02
LDB3-202ENST00000361373 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
LDB3-202ENST00000361373 OSBPP22059 807 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 TECP42680 631 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 EXOC8Q8IYI6 725 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
LDB3-202ENST00000361373 ABCD1P33897 745 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 MCM6Q14566 821 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 XKR9Q5GH70 373 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 ARMC9Q7Z3E5 817 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 MAIP1Q8WWC4 291 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 WDR11Q9BZH6 1224 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 TRPC6Q9Y210 931 aa14.92□□□□□ -0.02
LDB3-202ENST00000361373 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 PPP2R3AQ06190 1150 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 ATP6V0A1Q93050 837 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 DBNDD1Q9H9R9 158 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 PCDHA4Q9UN74 947 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 SOS2Q07890 1332 aaPredicted RBP14.91□□□□□ -0.02
LDB3-202ENST00000361373 IGSF3O75054 1194 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 CROCCP2Q86T23 111 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 FAM160B2Q86V87 743 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 FAM178BQ8IXR5 827 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 MIS12Q9H081 205 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 ARMCX3Q9UH62 379 aaPredicted RBP14.91□□□□□ -0.02
LDB3-202ENST00000361373 PPP6R2O75170 966 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 BMP3P12645 472 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 IFNAR1P17181 557 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 TNNI1P19237 187 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 DCUN1D2Q6PH85 259 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 FNBP4Q8N3X1 1017 aaPredicted RBP14.91□□□□□ -0.02
LDB3-202ENST00000361373 CCDC114Q96M63 670 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 BRIP1Q9BX63 1249 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 FAM204AQ9H8W3 233 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 TBC1D7Q9P0N9 293 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 CTTNBP2NLQ9P2B4 639 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 CD19P15391 556 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 PPP2R5AQ15172 486 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 KRBA2Q6ZNG9 492 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 RNF34Q969K3 372 aa14.91□□□□□ -0.02
LDB3-202ENST00000361373 SRP68Q9UHB9 627 aaKnown RBP14.91□□□□□ -0.02
LDB3-202ENST00000361373 SCRN1Q12765 414 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 AOC3Q16853 763 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 ZNF365Q70YC5 407 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 GADD45BO75293 160 aaPredicted RBP14.9□□□□□ -0.02
LDB3-202ENST00000361373 ATP5DP30049 168 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 LIG4P49917 911 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 PTGDRQ13258 359 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 SLC39A14Q15043 492 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 GPKOWQ92917 476 aaPredicted RBP eCLIP14.9□□□□□ -0.02
LDB3-202ENST00000361373 BLZF1Q9H2G9 400 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 CRB1P82279 1406 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 SASH1O94885 1247 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 STAT1P42224 750 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 TRIM28Q13263 835 aaKnown RBP14.9□□□□□ -0.02
LDB3-202ENST00000361373 FAM26FQ5R3K3 315 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 FAM102BQ5T8I3 360 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 DGKHQ86XP1 1220 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 JCADQ9P266 1359 aa14.9□□□□□ -0.02
LDB3-202ENST00000361373 CLRN2A0PK11 232 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 MYL1P05976 194 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 MRPS9P82933 396 aaKnown RBP14.89□□□□□ -0.03
LDB3-202ENST00000361373 RAD51AP2Q09MP3 1159 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 RASGRF1Q13972 1273 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 PODNQ7Z5L7 613 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 CMTR1Q8N1G2 835 aaKnown RBP14.89□□□□□ -0.03
LDB3-202ENST00000361373 IPO4Q8TEX9 1081 aaKnown RBP14.89□□□□□ -0.03
LDB3-202ENST00000361373 PLCD4Q9BRC7 762 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 SETBP1Q9Y6X0 1596 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 M0R2C6 588 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 ATF7P17544 494 aaPredicted RBP14.89□□□□□ -0.03
LDB3-202ENST00000361373 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
LDB3-202ENST00000361373 CFAP58Q5T655 872 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 PIM2Q9P1W9 311 aa14.89□□□□□ -0.03
LDB3-202ENST00000361373 FEZ2Q9UHY8 353 aaPredicted RBP14.89□□□□□ -0.03
LDB3-202ENST00000361373 CARMIL3Q8ND23 1372 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms