RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TTYH1Q9H313 450 aaPredicted RBP25.29■■□□□ 1.64
CD47-202ENST00000361309 MKNK2Q9HBH9 465 aa25.29■■□□□ 1.64
CD47-202ENST00000361309 VCANP13611 3396 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 GSG1L2A8MUP6 293 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 F5H6K3 240 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 ADAMTS4O75173 837 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 EPHB4P54760 987 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 KLRC3Q07444 240 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 NYAP2Q9P242 653 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 RIPK3Q9Y572 518 aa25.28■■□□□ 1.64
CD47-202ENST00000361309 MINDY4BA8MYZ0 360 aa25.27■■□□□ 1.64
CD47-202ENST00000361309 KIAA0355O15063 1070 aa25.27■■□□□ 1.64
CD47-202ENST00000361309 NDUFB10O96000 172 aa25.27■■□□□ 1.64
CD47-202ENST00000361309 RAG1P15918 1043 aa25.27■■□□□ 1.64
CD47-202ENST00000361309 MSL3Q8N5Y2 521 aaKnown RBP25.27■■□□□ 1.64
CD47-202ENST00000361309 MAFAQ8NHW3 353 aaPredicted RBP25.27■■□□□ 1.64
CD47-202ENST00000361309 DDX11Q96FC9 970 aa25.27■■□□□ 1.64
CD47-202ENST00000361309 TSEN34Q9BSV6 310 aaKnown RBP25.27■■□□□ 1.64
CD47-202ENST00000361309 TMEM39AQ9NV64 488 aa25.27■■□□□ 1.64
CD47-202ENST00000361309 SNAI1O95863 264 aaPredicted RBP25.26■■□□□ 1.63
CD47-202ENST00000361309 SLC4A3P48751 1232 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 ACLYP53396 1101 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 GIMAP6Q6P9H5 292 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 PRPF38AQ8NAV1 312 aaKnown RBP25.26■■□□□ 1.63
CD47-202ENST00000361309 MYLIPQ8WY64 445 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 OSBP2Q969R2 916 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 RNPC3Q96LT9 517 aaKnown RBP25.26■■□□□ 1.63
CD47-202ENST00000361309 ECHDC1Q9NTX5 307 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 FAM184BQ9ULE4 1060 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 SYNGAP1Q96PV0 1343 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 SYNRGQ9UMZ2 1314 aa25.26■■□□□ 1.63
CD47-202ENST00000361309 DNAJC25-GNG10A0A024R161 153 aa25.25■■□□□ 1.63
CD47-202ENST00000361309 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
CD47-202ENST00000361309 CPXCR1Q8N123 301 aa25.25■■□□□ 1.63
CD47-202ENST00000361309 STARD7Q9NQZ5 370 aa25.25■■□□□ 1.63
CD47-202ENST00000361309 CLIP2Q9UDT6 1046 aa25.25■■□□□ 1.63
CD47-202ENST00000361309 ZHX1Q9UKY1 873 aaPredicted RBP25.25■■□□□ 1.63
CD47-202ENST00000361309 FAAP100Q0VG06 881 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 KCNA10Q16322 511 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 MAMDC4Q6UXC1 1216 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 ANKRD33Q7Z3H0 272 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 KBTBD3Q8NAB2 608 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 KLHDC9Q8NEP7 349 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 NUP133Q8WUM0 1156 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 TOX2Q96NM4 488 aa25.24■■□□□ 1.63
CD47-202ENST00000361309 IGKV6D-41A0A0C4DH26 115 aa25.23■■□□□ 1.63
CD47-202ENST00000361309 ATP2A1O14983 1001 aa25.23■■□□□ 1.63
CD47-202ENST00000361309 ZBED4O75132 1171 aa25.23■■□□□ 1.63
CD47-202ENST00000361309 FPGSQ05932 587 aa25.23■■□□□ 1.63
CD47-202ENST00000361309 APPBP2Q92624 585 aa25.23■■□□□ 1.63
CD47-202ENST00000361309 RAVER2Q9HCJ3 691 aaKnown RBP25.23■■□□□ 1.63
CD47-202ENST00000361309 EPB41L4AQ9HCS5 686 aaPredicted RBP25.23■■□□□ 1.63
CD47-202ENST00000361309 RCAN3Q9UKA8 241 aa25.23■■□□□ 1.63
CD47-202ENST00000361309 CTDP1Q9Y5B0 961 aaPredicted RBP25.23■■□□□ 1.63
CD47-202ENST00000361309 MOXD2PA6NHM9 499 aa25.22■■□□□ 1.63
CD47-202ENST00000361309 DCDC2CA8MYV0 355 aa25.22■■□□□ 1.63
CD47-202ENST00000361309 C20orf194Q5TEA3 1177 aa25.22■■□□□ 1.63
CD47-202ENST00000361309 CCSAPQ6IQ19 270 aaPredicted RBP25.22■■□□□ 1.63
CD47-202ENST00000361309 KIFC2Q96AC6 838 aa25.22■■□□□ 1.63
CD47-202ENST00000361309 MYO9BQ13459 2157 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 MYADML2A6NDP7 307 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 RNF113AO15541 343 aaKnown RBP25.21■■□□□ 1.63
CD47-202ENST00000361309 GPAA1O43292 621 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 DUSP11O75319 330 aaKnown RBP25.21■■□□□ 1.63
CD47-202ENST00000361309 PRDM1O75626 825 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 IRX5P78411 483 aaPredicted RBP25.21■■□□□ 1.63
CD47-202ENST00000361309 ACVR2BQ13705 512 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 TSHZ3Q63HK5 1081 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 ZNF467Q7Z7K2 595 aaPredicted RBP25.21■■□□□ 1.63
CD47-202ENST00000361309 ZNF444Q8N0Y2 327 aaPredicted RBP25.21■■□□□ 1.63
CD47-202ENST00000361309 SLC38A10Q9HBR0 1119 aa25.21■■□□□ 1.63
CD47-202ENST00000361309 FOSL2P15408 326 aa25.2■■□□□ 1.62
CD47-202ENST00000361309 TDO2P48775 406 aa25.2■■□□□ 1.62
CD47-202ENST00000361309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.2■■□□□ 1.62
CD47-202ENST00000361309 ANKRD35Q8N283 1001 aa25.2■■□□□ 1.62
CD47-202ENST00000361309 MKL1Q969V6 931 aa25.2■■□□□ 1.62
CD47-202ENST00000361309 CEP95Q96GE4 821 aa25.2■■□□□ 1.62
CD47-202ENST00000361309 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.2■■□□□ 1.62
CD47-202ENST00000361309 FEM1BQ9UK73 627 aa25.2■■□□□ 1.62
CD47-202ENST00000361309 TMEM265A0A087WTH1 108 aa25.19■■□□□ 1.62
CD47-202ENST00000361309 ADCY6O43306 1168 aa25.19■■□□□ 1.62
CD47-202ENST00000361309 APPP05067 770 aa25.19■■□□□ 1.62
CD47-202ENST00000361309 GPATCH3Q96I76 525 aa25.19■■□□□ 1.62
CD47-202ENST00000361309 FGD4Q96M96 766 aa25.19■■□□□ 1.62
CD47-202ENST00000361309 MTMR4Q9NYA4 1195 aa25.19■■□□□ 1.62
CD47-202ENST00000361309 M0R2C6 588 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 TIMP1P01033 207 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 ZFYP08048 801 aaPredicted RBP25.18■■□□□ 1.62
CD47-202ENST00000361309 C6orf222P0C671 652 aaPredicted RBP25.18■■□□□ 1.62
CD47-202ENST00000361309 GNAT2P19087 354 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 CST5P28325 142 aaPredicted RBP25.18■■□□□ 1.62
CD47-202ENST00000361309 LRRC47Q8N1G4 583 aaKnown RBP25.18■■□□□ 1.62
CD47-202ENST00000361309 GLT1D1Q96MS3 346 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 ABHD16BQ9H3Z7 469 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 ZNF287Q9HBT7 754 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 TBX21Q9UL17 535 aa25.18■■□□□ 1.62
CD47-202ENST00000361309 SPTBN5Q9NRC6 3674 aaKnown RBP25.18■■□□□ 1.62
CD47-202ENST00000361309 ELP1O95163 1332 aa25.17■■□□□ 1.62
CD47-202ENST00000361309 TTLL1O95922 423 aa25.17■■□□□ 1.62
CD47-202ENST00000361309 ASGR1P07306 291 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms