RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 FMR1Q06787 632 aaKnown RBP eCLIP25.67■■□□□ 1.7
LDB1-201ENST00000361198 ZNF772Q68DY9 489 aaPredicted RBP25.67■■□□□ 1.7
LDB1-201ENST00000361198 C4orf32Q8N8J7 132 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 UBASH3AP57075 661 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 NAA30Q147X3 362 aaPredicted RBP25.67■■□□□ 1.7
LDB1-201ENST00000361198 DAGLBQ8NCG7 672 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 ZNF622Q969S3 477 aaKnown RBP eCLIP25.67■■□□□ 1.79e-11■□□□□ 10.4
LDB1-201ENST00000361198 CCDC34Q96HJ3 373 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 QSER1Q2KHR3 1735 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 CCDC194A0A1B0GVG4 234 aa25.66■■□□□ 1.7
LDB1-201ENST00000361198 SERPINC1P01008 464 aa25.66■■□□□ 1.7
LDB1-201ENST00000361198 USP40Q9NVE5 1235 aa25.66■■□□□ 1.7
LDB1-201ENST00000361198 GALNT17Q6IS24 598 aa25.66■■□□□ 1.7
LDB1-201ENST00000361198 TMX4Q9H1E5 349 aaPredicted RBP25.66■■□□□ 1.7
LDB1-201ENST00000361198 G3V3G9 751 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 ZSCAN20P17040 1043 aaPredicted RBP25.65■■□□□ 1.7
LDB1-201ENST00000361198 DCAF8Q5TAQ9 597 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 ARL6IP4Q66PJ3 421 aaKnown RBP25.65■■□□□ 1.7
LDB1-201ENST00000361198 HOMER1Q86YM7 354 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 PPP1R13BQ96KQ4 1090 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 DACH1Q9UI36 760 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 ZNF215Q9UL58 517 aaPredicted RBP25.65■■□□□ 1.7
LDB1-201ENST00000361198 NRDCO43847 1150 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 TUBB4AP04350 444 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 E2F4Q16254 413 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
LDB1-201ENST00000361198 MED15Q96RN5 788 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 KCNQ5Q9NR82 932 aa25.65■■□□□ 1.7
LDB1-201ENST00000361198 ADAMTSL1Q8N6G6 1762 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 USP17L5A8MUK1 530 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 DPYDQ12882 1025 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 INF2Q27J81 1249 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 HSP90AA4PQ58FG1 418 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 TRMT44Q8IYL2 757 aaKnown RBP25.64■■□□□ 1.7
LDB1-201ENST00000361198 DBNDD1Q9H9R9 158 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 MTMR4Q9NYA4 1195 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 NFE2L3Q9Y4A8 694 aa25.64■■□□□ 1.7
LDB1-201ENST00000361198 PLIN4Q96Q06 1357 aa25.64■■□□□ 1.69
LDB1-201ENST00000361198 CBFA2T2O43439 604 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 AKR1B1P15121 316 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 CFAP100Q494V2 611 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 ENOX1Q8TC92 643 aaKnown RBP25.63■■□□□ 1.69
LDB1-201ENST00000361198 STAMQ92783 540 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 ERO1AQ96HE7 468 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 ZMYND12Q9H0C1 365 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 CDC42EP5Q6NZY7 148 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 L2HGDHQ9H9P8 463 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 VAT1LQ9HCJ6 419 aa25.63■■□□□ 1.69
LDB1-201ENST00000361198 MYH8P13535 1937 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 NAPAP54920 295 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 APOBEC3HQ6NTF7 200 aaKnown RBP25.62■■□□□ 1.69
LDB1-201ENST00000361198 HHIPL2Q6UWX4 724 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 IQUBQ8NA54 791 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 UBA5Q9GZZ9 404 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 SERPINB13Q9UIV8 391 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 PDHBP11177 359 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 CDC25AP30304 524 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 TEKT1Q969V4 418 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 RRP36Q96EU6 259 aaKnown RBP25.62■■□□□ 1.69
LDB1-201ENST00000361198 TMX1Q9H3N1 280 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 PRDM4Q9UKN5 801 aa25.62■■□□□ 1.69
LDB1-201ENST00000361198 SMARCA1P28370 1054 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 LONP1P36776 959 aaKnown RBP25.61■■□□□ 1.69
LDB1-201ENST00000361198 EIF6P56537 245 aaKnown RBP25.61■■□□□ 1.69
LDB1-201ENST00000361198 C2CD5Q86YS7 1000 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 CLEC10AQ8IUN9 316 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 FAM177A1Q8N128 213 aaPredicted RBP25.61■■□□□ 1.69
LDB1-201ENST00000361198 PIGSQ96S52 555 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 OGFRQ9NZT2 677 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 SPDYE4A6NLX3 237 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 ZNF18P17022 549 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 PODNQ7Z5L7 613 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 LRRC47Q8N1G4 583 aaKnown RBP25.61■■□□□ 1.69
LDB1-201ENST00000361198 GSDMAQ96QA5 445 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 TMEM60Q9H2L4 133 aa25.61■■□□□ 1.69
LDB1-201ENST00000361198 IGKV6D-41A0A0C4DH26 115 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 SLU7O95391 586 aaKnown RBP25.6■■□□□ 1.69
LDB1-201ENST00000361198 UTP14CQ5TAP6 766 aaKnown RBP25.6■■□□□ 1.69
LDB1-201ENST00000361198 PDXDC2PQ6P474 469 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 MTRQ99707 1265 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 SEC63Q9UGP8 760 aaKnown RBP25.6■■□□□ 1.69
LDB1-201ENST00000361198 FRMPD2Q68DX3 1309 aaPredicted RBP25.6■■□□□ 1.69
LDB1-201ENST00000361198 SMCO2A6NFE2 343 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 TMEM232C9JQI7 657 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 ERCC5P28715 1186 aaPredicted RBP25.6■■□□□ 1.69
LDB1-201ENST00000361198 NFIAQ12857 509 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 VSTM4Q8IW00 320 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 CCDC12Q8WUD4 166 aaPredicted RBP25.6■■□□□ 1.69
LDB1-201ENST00000361198 INTS13Q9NVM9 706 aa25.6■■□□□ 1.69
LDB1-201ENST00000361198 CD44P16070 742 aaKnown RBP25.59■■□□□ 1.69
LDB1-201ENST00000361198 PTPN21Q16825 1174 aa25.59■■□□□ 1.69
LDB1-201ENST00000361198 RIOX1Q9H6W3 641 aa25.59■■□□□ 1.69
LDB1-201ENST00000361198 SHMT1P34896 483 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 CRKP46108 304 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 DMTNQ08495 405 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 BLZF1Q9H2G9 400 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 PRDM10Q9NQV6 1147 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 SAMSN1Q9NSI8 373 aaKnown RBP25.58■■□□□ 1.69
LDB1-201ENST00000361198 SWAP70Q9UH65 585 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 DDX41Q9UJV9 622 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms