RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 GCFC2P16383 781 aaKnown RBP11.05□□□□□ -0.64
SIN3A-201ENST00000360439 ACTN3Q08043 901 aaPredicted RBP11.05□□□□□ -0.64
SIN3A-201ENST00000360439 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 KCNB2Q92953 911 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 TBC1D31Q96DN5 1066 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 ZCCHC17Q9NP64 241 aaKnown RBP11.05□□□□□ -0.64
SIN3A-201ENST00000360439 BTDP43251 543 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 TANGO6Q9C0B7 1094 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.05□□□□□ -0.64
SIN3A-201ENST00000360439 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 BAIAP2L1Q9UHR4 511 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 PAIP2BQ9ULR5 123 aaKnown RBP11.05□□□□□ -0.64
SIN3A-201ENST00000360439 ABT1Q9ULW3 272 aaKnown RBP11.05□□□□□ -0.64
SIN3A-201ENST00000360439 CNTNAP4Q9C0A0 1308 aa11.05□□□□□ -0.64
SIN3A-201ENST00000360439 PPFIA2O75334 1257 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 DPEP1P16444 411 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 PLA2G4DQ86XP0 818 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 B4GALNT2Q8NHY0 566 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
SIN3A-201ENST00000360439 SLC26A6Q9BXS9 759 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 ZBTB43O43298 467 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 RESTQ13127 1097 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 ANO1Q5XXA6 986 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 TSHZ1Q6ZSZ6 1077 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 TMEM110Q86TL2 294 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 FCHSD1Q86WN1 690 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 PNMA2Q9UL42 364 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 TULP2O00295 520 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 ARHGEF10LQ9HCE6 1279 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.04□□□□□ -0.647e-7■■■□□ 17.3
SIN3A-201ENST00000360439 STK10O94804 968 aaKnown RBP11.04□□□□□ -0.64
SIN3A-201ENST00000360439 LARGE1O95461 756 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 SMCR8Q8TEV9 937 aaPredicted RBP11.04□□□□□ -0.64
SIN3A-201ENST00000360439 ATRIPQ8WXE1 791 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 TMEM87BQ96K49 555 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 UNC45AQ9H3U1 944 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 RABL2AQ9UBK7 228 aaPredicted RBP11.04□□□□□ -0.64
SIN3A-201ENST00000360439 MINPP1Q9UNW1 487 aa11.04□□□□□ -0.64
SIN3A-201ENST00000360439 ABL2P42684 1182 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 RCOR1Q9UKL0 485 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 SMAPO00193 183 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 BIN1O00499 593 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 JAK2O60674 1132 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 CIAO1O76071 339 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 PCK1P35558 622 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 PDE1CQ14123 709 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 TBC1D10BQ4KMP7 808 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 EPHA10Q5JZY3 1008 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 C17orf50Q8WW18 174 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 RIPOR2Q9Y4F9 1068 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 CUTAO60888 179 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 GOLGA1Q92805 767 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 CCDC160A6NGH7 325 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 PTPN12Q05209 780 aaKnown RBP11.03□□□□□ -0.64
SIN3A-201ENST00000360439 USP6NLQ92738 828 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 BPIFA3Q9BQP9 254 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 LCMT1Q9UIC8 334 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 AKAP12Q02952 1782 aa11.03□□□□□ -0.64
SIN3A-201ENST00000360439 E7EWF7 191 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 ZEB2O60315 1214 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 SPAG1Q07617 926 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 MTA1Q13330 715 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 FBXW10Q5XX13 1052 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 PTF1AQ7RTS3 328 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.64
SIN3A-201ENST00000360439 CHUKO15111 745 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 EHBP1Q8NDI1 1231 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 RMDN2Q96LZ7 410 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 RMND1Q9NWS8 449 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 GYS1P13807 737 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 CAPRIN2Q6IMN6 1127 aaKnown RBP11.02□□□□□ -0.65
SIN3A-201ENST00000360439 FAM173BQ6P4H8 233 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
SIN3A-201ENST00000360439 ZNF365Q70YC5 407 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 SDR42E1Q8WUS8 393 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
SIN3A-201ENST00000360439 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 USP17L21D6R901 530 aa11.02□□□□□ -0.65
SIN3A-201ENST00000360439 IPO5O00410 1097 aaKnown RBP11.02□□□□□ -0.65
SIN3A-201ENST00000360439 IGBP1P78318 339 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms