RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 RAD50Q92878 1312 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 POLD1P28340 1107 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 ZNF408Q9H9D4 720 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 NUMA1Q14980 2115 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 STX1BP61266 288 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 NR1I2O75469 434 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 PDZD4Q76G19 769 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 SGK1O00141 431 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 FBXL13Q8NEE6 735 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 NEUROG2Q9H2A3 272 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 GPC4O75487 556 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 XRCC5P13010 732 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 TAB3Q8N5C8 712 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 TRIM58Q8NG06 486 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 RMDN2Q96LZ7 410 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 PDXDC1Q6P996 788 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 POC1B-GALNT4F8VUJ3 575 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 U2AF1L4Q8WU68 220 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 HLA-DPA1P20036 260 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 HADHQ16836 314 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 SNX21Q969T3 373 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 ART3Q13508 389 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 ENAHQ8N8S7 591 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 GNA14O95837 355 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 BLVRAP53004 296 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 BCAS4Q8TDM0 211 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 SNX29Q8TEQ0 813 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 HSPA8P11142 646 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 ZNF75DP51815 510 aa18.91■□□□□ 0.62
CACNA1A-201ENST00000360228 MYH11P35749 1972 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 RNF169Q8NCN4 708 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 TYW5A2RUC4 315 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 CYP2J2P51589 502 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 POLE2P56282 527 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 RYBPQ8N488 228 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 STAT1P42224 750 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 NELFCDQ8IXH7 590 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 TXLNGQ9NUQ3 528 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 MAGED2Q9UNF1 606 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 PARP3Q9Y6F1 533 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 MICAL3Q7RTP6 2002 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 MAP3K7O43318 606 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 BUB1O43683 1085 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 PPP2R5EQ16537 467 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 A6NJR5 290 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 PDE6CP51160 858 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 ADKP55263 362 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 IFT88Q13099 833 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 ACRBPQ8NEB7 543 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 NLRC4Q9NPP4 1024 aa18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 CDV3Q9UKY7 258 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-201ENST00000360228 CCDC84Q86UT8 332 aaPredicted RBP18.89■□□□□ 0.62
CACNA1A-201ENST00000360228 MED4Q9NPJ6 270 aa18.89■□□□□ 0.62
CACNA1A-201ENST00000360228 PA2G4Q9UQ80 394 aaKnown RBP18.89■□□□□ 0.62
CACNA1A-201ENST00000360228 XPAP23025 273 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 LMBR1LQ6UX01 489 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 SZRD1Q7Z422 152 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 TPH2Q8IWU9 490 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 TEX11Q8IYF3 940 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 PRPF38AQ8NAV1 312 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 FAM95CA0A1B0GW59 222 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 IL9RQ01113 521 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 CCDC85BQ15834 202 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 GLE1Q53GS7 698 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 GOLGA5Q8TBA6 731 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 ABCF3Q9NUQ8 709 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 TTC30BQ8N4P2 665 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 SYCE1LA8MT33 242 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 TSC22D3Q99576 134 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 CAPN11Q9UMQ6 739 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 B4E1Z4 1266 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 NLRP12P59046 1061 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 COPS6Q7L5N1 327 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 GLT8D2Q9H1C3 349 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 PNMA2Q9UL42 364 aa18.89■□□□□ 0.61
CACNA1A-201ENST00000360228 HEXIM1O94992 359 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 OTUD6AQ7L8S5 288 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 FBXO2Q9UK22 296 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 CREB3O43889 395 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 MCF2P10911 925 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 TTC38Q5R3I4 469 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 FAM102BQ5T8I3 360 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 ZNF449Q6P9G9 518 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 CDC26Q8NHZ8 85 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 KIFC3Q9BVG8 833 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 SRGAP2BP0DMP2 458 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 ZSCAN32Q9NX65 697 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 PCDHB13Q9Y5F0 798 aa18.88■□□□□ 0.61
CACNA1A-201ENST00000360228 N4BP2L2Q92802 583 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-201ENST00000360228 YWHAGP61981 247 aaKnown RBP eCLIP18.87■□□□□ 0.61
CACNA1A-201ENST00000360228 TFCP2Q12800 502 aa18.87■□□□□ 0.61
CACNA1A-201ENST00000360228 MLKLQ8NB16 471 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms