RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 FAM84BQ96KN1 310 aaPredicted RBP23.35■■□□□ 1.33
TRIM3-202ENST00000359518 LCMT1Q9UIC8 334 aa23.35■■□□□ 1.33
TRIM3-202ENST00000359518 DDAH1O94760 285 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 KCNQ4P56696 695 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 ERFEQ4G0M1 354 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 STAG2Q8N3U4 1231 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 HNRNPLLQ8WVV9 542 aaKnown RBP23.34■■□□□ 1.33
TRIM3-202ENST00000359518 TRIM47Q96LD4 638 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 BRIP1Q9BX63 1249 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 LUC7L2Q9Y383 392 aaKnown RBP23.34■■□□□ 1.33
TRIM3-202ENST00000359518 KLK7P49862 253 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 PIP4K2BP78356 416 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 EXOC4Q96A65 974 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 TMEM60Q9H2L4 133 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 ANKRD36CQ5JPF3 1778 aa23.34■■□□□ 1.33
TRIM3-202ENST00000359518 LRRIQ3A6PVS8 624 aaPredicted RBP23.33■■□□□ 1.33
TRIM3-202ENST00000359518 PRDX5P30044 214 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 MECOMQ03112 1051 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 ITPK1Q13572 414 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 WHAMMP3Q1A5X7 153 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 CCDC122Q5T0U0 273 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 OR8K1Q8NGG5 319 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 BCORQ6W2J9 1755 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 POTEB2H3BUK9 544 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 ATP1A1P05023 1023 aaKnown RBP23.33■■□□□ 1.33
TRIM3-202ENST00000359518 USP5P45974 858 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 PFKFB3Q16875 520 aaPredicted RBP23.33■■□□□ 1.33
TRIM3-202ENST00000359518 TYW1BQ6NUM6 668 aa23.33■■□□□ 1.33
TRIM3-202ENST00000359518 DCP1AQ9NPI6 582 aaPredicted RBP23.33■■□□□ 1.33
TRIM3-202ENST00000359518 B4DLN1 442 aa23.33■■□□□ 1.32
TRIM3-202ENST00000359518 FECHP22830 423 aa23.33■■□□□ 1.32
TRIM3-202ENST00000359518 SKIDA1Q1XH10 827 aa23.33■■□□□ 1.32
TRIM3-202ENST00000359518 MB21D1Q8N884 522 aa23.33■■□□□ 1.32
TRIM3-202ENST00000359518 CELF1Q92879 486 aaKnown RBP23.33■■□□□ 1.32
TRIM3-202ENST00000359518 AGPAT5Q9NUQ2 364 aa23.33■■□□□ 1.32
TRIM3-202ENST00000359518 TAF1P21675 1872 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-202ENST00000359518 TNNT3P45378 269 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-202ENST00000359518 AMPD2Q01433 879 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 INF2Q27J81 1249 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 PARP10Q53GL7 1025 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 BLIDQ8IZY5 108 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 PCMTD1Q96MG8 357 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-202ENST00000359518 MMS19Q96T76 1030 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 ZNF804BA4D1E1 1349 aa23.32■■□□□ 1.32
TRIM3-202ENST00000359518 ZNF335Q9H4Z2 1342 aaPredicted RBP23.31■■□□□ 1.32
TRIM3-202ENST00000359518 TULP2O00295 520 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 EIF3JO75822 258 aaKnown RBP23.31■■□□□ 1.32
TRIM3-202ENST00000359518 USP17L8P0C7I0 530 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 TSR1Q2NL82 804 aaKnown RBP23.31■■□□□ 1.32
TRIM3-202ENST00000359518 NAALADL2Q58DX5 795 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 CPVLQ9H3G5 476 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 RMND1Q9NWS8 449 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 MINPP1Q9UNW1 487 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 DUSP10Q9Y6W6 482 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 TRIM66O15016 1216 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 UBA7P41226 1012 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 HSP90B2PQ58FF3 399 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 KIAA1328Q86T90 577 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 ADSSL1Q8N142 457 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 NSUN4Q96CB9 384 aaKnown RBP23.31■■□□□ 1.32
TRIM3-202ENST00000359518 DISC1Q9NRI5 854 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 MCM9Q9NXL9 1143 aa23.31■■□□□ 1.32
TRIM3-202ENST00000359518 LRP5O75197 1615 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 LOC102724428A0A0B4J2F2 783 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 SIK1P57059 783 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 HERVK_113P62684 666 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 CYP27A1Q02318 531 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 FOXR1Q6PIV2 292 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 WDR59Q6PJI9 974 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 DTHD1Q6ZMT9 781 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 GSPT2Q8IYD1 628 aaKnown RBP23.3■■□□□ 1.32
TRIM3-202ENST00000359518 C4orf32Q8N8J7 132 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
TRIM3-202ENST00000359518 CCDC194A0A1B0GVG4 234 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 H7C1D1 291 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 DYNLL2Q96FJ2 89 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.3■■□□□ 1.32
TRIM3-202ENST00000359518 MYH13Q9UKX3 1938 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 C10orf67Q8IYJ2 551 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 LACRTQ9GZZ8 138 aa23.3■■□□□ 1.32
TRIM3-202ENST00000359518 RCCD1A6NED2 376 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 NKRFO15226 690 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRIM3-202ENST00000359518 ZNF185O15231 689 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 ERCC3P19447 782 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 TRIM21P19474 475 aaKnown RBP23.29■■□□□ 1.32
TRIM3-202ENST00000359518 TFAP4Q01664 338 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 TRIM14Q14142 442 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 RCSD1Q6JBY9 416 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 HEATR3Q7Z4Q2 680 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 CCDC148Q8NFR7 591 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 PLEKHA4Q9H4M7 779 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 DUOX1Q9NRD9 1551 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 MACROD2A1Z1Q3 448 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 TUBB2AQ13885 445 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 LRRC15Q8TF66 581 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 TUBB2BQ9BVA1 445 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 KAT14Q9H8E8 782 aa23.29■■□□□ 1.32
TRIM3-202ENST00000359518 MAGEC2Q9UBF1 373 aaPredicted RBP23.29■■□□□ 1.32
TRIM3-202ENST00000359518 ARAP2Q8WZ64 1704 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms