RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 E4F1Q66K89 784 aaPredicted RBP21.16■□□□□ 0.98
SNX11-201ENST00000359238 ATL3Q6DD88 541 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 CTCFLQ8NI51 663 aaPredicted RBP21.16■□□□□ 0.98
SNX11-201ENST00000359238 PPP1R13BQ96KQ4 1090 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 CLIC6Q96NY7 704 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 TRERF1Q96PN7 1200 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 TAOK3Q9H2K8 898 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 AKR1B1P15121 316 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 NDUFA8P51970 172 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 GRIN1Q05586 938 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 TMCO3Q6UWJ1 677 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 NIM1KQ8IY84 436 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 ANKS1AQ92625 1134 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 DNAJC18Q9H819 358 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 SERPINA10Q9UK55 444 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 CD2APQ9Y5K6 639 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 TYW1BQ6NUM6 668 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 RSBN1LQ6PCB5 846 aaPredicted RBP21.15■□□□□ 0.98
SNX11-201ENST00000359238 LRRN4CLQ8ND94 238 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
SNX11-201ENST00000359238 ANO10Q9NW15 660 aa21.15■□□□□ 0.98
SNX11-201ENST00000359238 NFKBIEO00221 500 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 YEATS4O95619 227 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 CALM1P0DP23 149 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 CALM2P0DP24 149 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 CALM3P0DP25 149 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 CFAP100Q494V2 611 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 SYT10Q6XYQ8 523 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 SH3BP5LQ7L8J4 393 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 NEDD1Q8NHV4 660 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 GPKOWQ92917 476 aaPredicted RBP eCLIP21.14■□□□□ 0.97
SNX11-201ENST00000359238 PHF20Q9BVI0 1012 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 UBXN6Q9BZV1 441 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 TCP11L1Q9NUJ3 509 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 FAM198AQ9UFP1 575 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.97
SNX11-201ENST00000359238 DDTLA6NHG4 134 aaPredicted RBP21.13■□□□□ 0.97
SNX11-201ENST00000359238 HDLBPQ00341 1268 aaKnown RBP21.13■□□□□ 0.97
SNX11-201ENST00000359238 MAPK8IP2Q13387 824 aaPredicted RBP21.13■□□□□ 0.97
SNX11-201ENST00000359238 SLC39A14Q15043 492 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 ADALQ6DHV7 355 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 WASF1Q92558 559 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 MRIQ9BWK5 157 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
SNX11-201ENST00000359238 DHX8Q14562 1220 aaKnown RBP21.13■□□□□ 0.97
SNX11-201ENST00000359238 CCDC150Q8NCX0 1101 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 CABP5Q9NP86 173 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 ZNRF3Q9ULT6 936 aa21.13■□□□□ 0.97
SNX11-201ENST00000359238 BRCA1P38398 1863 aaKnown RBP21.13■□□□□ 0.97
SNX11-201ENST00000359238 SHMT1P34896 483 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 PPP2R5BQ15173 497 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 SPECC1Q5M775 1068 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 USP17L2Q6R6M4 530 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 FMR1NBQ8N0W7 255 aaPredicted RBP21.12■□□□□ 0.97
SNX11-201ENST00000359238 PRMT6Q96LA8 375 aaPredicted RBP21.12■□□□□ 0.97
SNX11-201ENST00000359238 EFCC1Q9HA90 598 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 VIL1P09327 827 aaKnown RBP21.12■□□□□ 0.97
SNX11-201ENST00000359238 AKAP17AQ02040 695 aaKnown RBP21.12■□□□□ 0.97
SNX11-201ENST00000359238 GRM4Q14833 912 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 PSME4Q14997 1843 aa21.12■□□□□ 0.97
SNX11-201ENST00000359238 RASSF7Q02833 373 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 SHC4Q6S5L8 630 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 NEK11Q8NG66 645 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 UBXN4Q92575 508 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 CEP57L1Q8IYX8 460 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 LRRC47Q8N1G4 583 aaKnown RBP21.11■□□□□ 0.97
SNX11-201ENST00000359238 RGS22Q8NE09 1264 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 KCNG4Q8TDN1 519 aa21.11■□□□□ 0.97
SNX11-201ENST00000359238 FOXP1Q9H334 677 aaPredicted RBP21.11■□□□□ 0.97
SNX11-201ENST00000359238 TPM1P09493 284 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 FAM160A1Q05DH4 1040 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 MRPS27Q92552 414 aaKnown RBP21.1■□□□□ 0.97
SNX11-201ENST00000359238 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 SRRTQ9BXP5 876 aaKnown RBP21.1■□□□□ 0.97
SNX11-201ENST00000359238 SERPINB13Q9UIV8 391 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 PHLPP2Q6ZVD8 1323 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 SCG2P13521 617 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 CXCL9Q07325 125 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 GPS2Q13227 327 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 GMLQ99445 158 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 NAT10Q9H0A0 1025 aaKnown RBP21.1■□□□□ 0.97
SNX11-201ENST00000359238 VPS33BQ9H267 617 aa21.1■□□□□ 0.97
SNX11-201ENST00000359238 MYO3BQ8WXR4 1341 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 PALM3A6NDB9 673 aaPredicted RBP21.09■□□□□ 0.97
SNX11-201ENST00000359238 POLR3GO15318 223 aaPredicted RBP21.09■□□□□ 0.97
SNX11-201ENST00000359238 PFKFB3Q16875 520 aaPredicted RBP21.09■□□□□ 0.97
SNX11-201ENST00000359238 ZSCAN29Q8IWY8 852 aaPredicted RBP21.09■□□□□ 0.97
SNX11-201ENST00000359238 JDP2Q8WYK2 163 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 RASSF4Q9H2L5 321 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 USP17L5A8MUK1 530 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 SAFBQ15424 915 aaKnown RBP eCLIP21.09■□□□□ 0.97
SNX11-201ENST00000359238 KRBA2Q6ZNG9 492 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 AOPEPQ8N6M6 819 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 RASGRP4Q8TDF6 673 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 IDI2Q9BXS1 227 aa21.09■□□□□ 0.97
SNX11-201ENST00000359238 GREB1LQ9C091 1923 aaPredicted RBP21.08■□□□□ 0.97
SNX11-201ENST00000359238 MYH4Q9Y623 1939 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 A0A1W2PQ27 194 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms