RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 LEO1Q8WVC0 666 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 WRNIP1Q96S55 665 aa12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 CABP5Q9NP86 173 aa12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 DDX19AQ9NUU7 478 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
TRAPPC4-201ENST00000359005 ATRNL1Q5VV63 1379 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 CTAGE5O15320 804 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 KRT2P35908 639 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 CRHR2Q13324 411 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 NBPF11Q86T75 865 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 NOSTRINQ8IVI9 506 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 GPT2Q8TD30 523 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 HOOK2Q96ED9 719 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 KANSL2Q9H9L4 492 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 MYH8P13535 1937 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 BRCA2P51587 3418 aa12.36□□□□□ -0.43
TRAPPC4-201ENST00000359005 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 SPDYE5A6NIY4 337 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 MPHOSPH10O00566 681 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 IRF6O14896 467 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 SCG2P13521 617 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 ME1P48163 572 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 FOSBP53539 338 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 INHBEP58166 350 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 TRAF1Q13077 416 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 GDPD2Q9HCC8 539 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 MTMR4Q9NYA4 1195 aa12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-201ENST00000359005 MKI67P46013 3256 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 A0A1W2PQ27 194 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 A0A1W2PQ64 194 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 A0A1W2PQD8 194 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 FKTNO75072 461 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 PPP6R2O75170 966 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 NOVP48745 357 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 TMEM179Q6ZVK1 233 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 DIS3L2Q8IYB7 885 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-201ENST00000359005 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 SPTLC2O15270 562 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 NMT2O60551 498 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 CAVIN2O95810 425 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 GNA11P29992 359 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 RGS19P49795 217 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 NLRP5P59047 1200 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 MAP3K10Q02779 954 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 MOGSQ13724 837 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 CCL15Q16663 113 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 ADALQ6DHV7 355 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 SLC44A5Q8NCS7 719 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 ZNF341Q9BYN7 854 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 GLT8D2Q9H1C3 349 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 GINM1Q9NU53 330 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 CSADQ9Y600 493 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 CNTNAP5Q8WYK1 1306 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 MYH6P13533 1939 aa12.33□□□□□ -0.44
TRAPPC4-201ENST00000359005 FAM196BA6NMK8 535 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 KLRF2D3W0D1 207 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms