RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LONRF2Q1L5Z9 754 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 CEP85LQ5SZL2 805 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 SYCE1Q8N0S2 351 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 BCAS4Q8TDM0 211 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 PGBD1Q96JS3 809 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 ATP8A2Q9NTI2 1148 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 FAM98CQ17RN3 349 aaKnown RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 TPH2Q8IWU9 490 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 MAN1B1Q9UKM7 699 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 DDAH1O94760 285 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 ATP5DP30049 168 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 ARHGAP25P42331 645 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 POLR2FP61218 127 aaKnown RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 B4DLN1 442 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 NAA25Q14CX7 972 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 FAM26FQ5R3K3 315 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 TBC1D22AQ8WUA7 517 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 SREK1Q8WXA9 508 aaKnown RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 PSMD1Q99460 953 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 STIM2Q9P246 746 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 TXNDC16Q9P2K2 825 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 FRMPD2Q68DX3 1309 aaPredicted RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 BCRP11274 1271 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 DPP8Q6V1X1 898 aaPredicted RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 FNBP4Q8N3X1 1017 aaPredicted RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 ENOX1Q8TC92 643 aaKnown RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 ERBB3P21860 1342 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 MMP1P03956 469 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 CTNNA1P35221 906 aaKnown RBP15.16■□□□□ 0.02
VCP-201ENST00000358901 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 AMFRQ9UKV5 643 aa15.16■□□□□ 0.02
VCP-201ENST00000358901 ZMYND10O75800 440 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 MYCLP12524 364 aaPredicted RBP15.15■□□□□ 0.02
VCP-201ENST00000358901 CNOT6LQ96LI5 555 aaKnown RBP15.15■□□□□ 0.02
VCP-201ENST00000358901 PSTPIP2Q9H939 334 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 GNA14O95837 355 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 CLEC17AQ6ZS10 378 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 IFT74Q96LB3 600 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 MED4Q9NPJ6 270 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 AGTPBP1Q9UPW5 1226 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 FERP16591 822 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 USTQ9Y2C2 406 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 KRIT1O00522 736 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 CYP2J2P51589 502 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 MTMR3Q13615 1198 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 PRR16Q569H4 304 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 ACRBPQ8NEB7 543 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 USP40Q9NVE5 1235 aa15.15■□□□□ 0.02
VCP-201ENST00000358901 SOWAHDA6NJG2 315 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 DYNLL1P63167 89 aaKnown RBP15.14■□□□□ 0.01
VCP-201ENST00000358901 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 VSIG1Q86XK7 387 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 LCORLQ8N3X6 602 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 RSRC1Q96IZ7 334 aaKnown RBP15.14■□□□□ 0.01
VCP-201ENST00000358901 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 PHLPP2Q6ZVD8 1323 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 EHHADHQ08426 723 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 FBXO38Q6PIJ6 1188 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 CCDC97Q96F63 343 aaPredicted RBP15.14■□□□□ 0.01
VCP-201ENST00000358901 TRAPPC10P48553 1259 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 CLCN6P51797 869 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 DMTNQ08495 405 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 TTC16Q8NEE8 873 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 FAM71BQ8TC56 605 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 EPSTI1Q96J88 318 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 TRIM7Q9C029 511 aa15.14■□□□□ 0.01
VCP-201ENST00000358901 H2AFZP0C0S5 128 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 ADAM9Q13443 819 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 GALNT17Q6IS24 598 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 H2AFVQ71UI9 128 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 ADAT2Q7Z6V5 191 aaKnown RBP15.13■□□□□ 0.01
VCP-201ENST00000358901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.13■□□□□ 0.01
VCP-201ENST00000358901 KDM3AQ9Y4C1 1321 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 LIN9Q5TKA1 542 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 CROCCP2Q86T23 111 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 RAB17Q9H0T7 212 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 DPH5Q9H2P9 285 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 PANK4Q9NVE7 773 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 EXOC7Q9UPT5 735 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
VCP-201ENST00000358901 VGLL3A8MV65 326 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 PCP11498 1178 aaKnown RBP15.13■□□□□ 0.01
VCP-201ENST00000358901 LIFRP42702 1097 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 GUCY2DQ02846 1103 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 DENND2CQ68D51 928 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 TAOK1Q7L7X3 1001 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms