RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 BPIFA3Q9BQP9 254 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 OAS2P29728 719 aaKnown RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
COL20A1-201ENST00000358894 TCP10Q12799 353 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 NELFCDQ8IXH7 590 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 HINFPQ9BQA5 517 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
COL20A1-201ENST00000358894 PCP11498 1178 aaKnown RBP13.68□□□□□ -0.22
COL20A1-201ENST00000358894 ADCY7P51828 1080 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 HDXQ7Z353 690 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 SLC35F6Q8N357 371 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
COL20A1-201ENST00000358894 GDAQ9Y2T3 454 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 TEX33O43247 280 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 OR52Z1P0C646 297 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
COL20A1-201ENST00000358894 TOGARAM2Q6ZUX3 1019 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 SLC44A5Q8NCS7 719 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 ERMNQ8TAM6 284 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 LONP1P36776 959 aaKnown RBP13.68□□□□□ -0.22
COL20A1-201ENST00000358894 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
COL20A1-201ENST00000358894 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 RBM17Q96I25 401 aaKnown RBP13.68□□□□□ -0.22
COL20A1-201ENST00000358894 AGXT2Q9BYV1 514 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 H7C1D1 291 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 ENC1O14682 589 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 CLCN6P51797 869 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 PPARDQ03181 441 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 RAPGEF1Q13905 1077 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
COL20A1-201ENST00000358894 NEK8Q86SG6 692 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 FBXO2Q9UK22 296 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 MYO6Q9UM54 1294 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 CUL4BQ13620 913 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 BRIP1Q9BX63 1249 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 SAMM50Q9Y512 469 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 EPN1Q9Y6I3 576 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 FER1L4A9Z1Z3 1794 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 PHLPP2Q6ZVD8 1323 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 B4DLN1 442 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 ERLIN2O94905 339 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 TRAPPC10P48553 1259 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 SYCP3Q8IZU3 236 aa13.67□□□□□ -0.22
COL20A1-201ENST00000358894 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
COL20A1-201ENST00000358894 FAM170AA1A519 330 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 SEMA3EO15041 775 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 SCNN1DP51172 638 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 LZTS2Q9BRK4 669 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
COL20A1-201ENST00000358894 TERF2Q15554 542 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 TAX1BP1Q86VP1 789 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
COL20A1-201ENST00000358894 SLC1A4P43007 532 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 MAGEA1P43355 309 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 MTF1Q14872 753 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 KRT31Q15323 416 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 MAATS1Q7Z4T9 603 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 RGPD8O14715 1765 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-201ENST00000358894 PNPLA7Q6ZV29 1317 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 DNM2P50570 870 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 HNRNPH2P55795 449 aaKnown RBP13.65□□□□□ -0.22
COL20A1-201ENST00000358894 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-201ENST00000358894 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 IFT81Q8WYA0 676 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
COL20A1-201ENST00000358894 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
COL20A1-201ENST00000358894 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-201ENST00000358894 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 TUBE1Q9UJT0 475 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 MST1RQ04912 1400 aa13.65□□□□□ -0.22
COL20A1-201ENST00000358894 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 ANKRD65E5RJM6 399 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 USH1GQ495M9 461 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms